Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1311 ATGTCCGAATCAAACGCAATTGCAAATGGATTGGCTGGTGCAGGAGGTGGAATCATTGCTCAAATCATGACGTATCCTCTTCAAACGGTAAACACGCGCCAGCAAACTGAGAGAACAATCAAGAGGAACAAGCAAAGTTTGCCCACCAACACAACCACTTCTCCTGGCACTCTTCTTCAGATCTTTCAGGTCATTAGAACTGAGGGTTGGGGCGGACTCTACAGTGGCCTCAAGCCTTCTCTTCTTGGAACTGCTGCTTCTCAGGGTATTTACTACTATTTCTATCAAGTTTTGAAGAACAAGGCAGTGGCGATTACAGCTGCACGGAAACTGAAAGGGCATGGAGATGGTACTGTTGGGATGTTTGGTTGGCTTGTTGTGGCTGCAATTGCTGGGTCCTTGAATGTGTTGCTGACAAATCCAATATGGGTTTTAGTGACTAGAATGCAGACTCATACTCAAGCAGAAAGGAAAATTATGGAGGAAAAGAAAGAAGCTTTAAGGAAGGCTGCTTCCGAAAGCACCATAGCAGACTCCACATTGCAAGATAAATTGGATGAACTGAGTTCTACAAAACCTCGACCATATGGAACTATACATGCAGCTAATGAAGTCTACAATGAAGCGGGTACAGTAGGATTTTGGAAGGGTGTCATCCCTGCCCTTATTATGGTTTGCAATCCATCAATTCAGTTTATGATTTATGAAAGCTCATTAAAGCATCTAAGGGCAAAACGTGCAGCTAAGAAGCAAGGGGATACAAGTATATCTGCTTTGGAGGTCTTTTTGGTGGGAGCAATAGCTAAGCTTGGAGCCACTGTGACAACATATCCATTACAAGTTGTGAAGTCAAGGCTTCAAGCAAAACAGGAGATTGGTGGAAGTAACTCATTAAGATACTCAGGTACTTTTGATGCAGTACTTAAAATGATCCGTTATGAAGGAATAACTGGCTTCTATAAGGGGATGAGCACAAAGATAGTGCAGAGTGTTTTTGCAGCTTCTGTTCTGTTCATGGTCAAAGAGGAGCTTGTTAAGGCTTTTATAAATCTATCCGATAAGAGCAAAAAAGTTGCATCAAATTTAAGTAGTTGA 1095 0.4219 MSESNAIANGLAGAGGGIIAQIMTYPLQTVNTRQQTERTIKRNKQSLPTNTTTSPGTLLQIFQVIRTEGWGGLYSGLKPSLLGTAASQGIYYYFYQVLKNKAVAITAARKLKGHGDGTVGMFGWLVVAAIAGSLNVLLTNPIWVLVTRMQTHTQAERKIMEEKKEALRKAASESTIADSTLQDKLDELSSTKPRPYGTIHAANEVYNEAGTVGFWKGVIPALIMVCNPSIQFMIYESSLKHLRAKRAAKKQGDTSISALEVFLVGAIAKLGATVTTYPLQVVKSRLQAKQEIGGSNSLRYSGTFDAVLKMIRYEGITGFYKGMSTKIVQSVFAASVLFMVKEELVKAFINLSDKSKKVASNLSS* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1311 364 ProSiteProfiles Solute carrier (Solcar) repeat profile. 119 241 IPR018108 -
Pvu1g1311 364 Gene3D Mitochondrial carrier domain 170 363 IPR023395 -
Pvu1g1311 364 Gene3D Mitochondrial carrier domain 1 169 IPR023395 -
Pvu1g1311 364 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 101 IPR018108 -
Pvu1g1311 364 ProSiteProfiles Solute carrier (Solcar) repeat profile. 256 347 IPR018108 -
Pvu1g1311 364 Pfam Mitochondrial carrier protein 4 100 IPR018108 -
Pvu1g1311 364 Pfam Mitochondrial carrier protein 256 349 IPR018108 -
Pvu1g1311 364 Pfam Mitochondrial carrier protein 119 243 IPR018108 -
Pvu1g1311 364 PANTHER PEROXISOMAL NICOTINAMIDE ADENINE DINUCLEOTIDE CARRIER 4 355 - -
Pvu1g1311 364 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 4 355 IPR044712 GO:0006862|GO:0055085
Pvu1g1311 364 SUPERFAMILY Mitochondrial carrier 5 343 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1311 Pvu-Chr1 35492458 35497687 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1311 64 357 Chloroplast and Mitochondria Gene Families AT1G25380 25.902 3.05e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1311 K13354 - gmx:100775304 624.78