Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1310 ATGGGAGGAAGTCCTAAGACACGAGGGATCCATGCAGGTGGAAGCTTTAACCGTATTCTGAAACACGGAAAAAAATCATTGGCTTATCAAATTCTCTATCGAGCTATGAAAAATATTCAACAAAAGACAGAAACAAATCCACTATCTATTTTACGTCAAGCAATACGTGGAGTAACTCCCGATAGCATTCCCGTTGAAATAGGATCCGCACAAGGAAAAGCACTTGCCATTCGTTGGTTATTGGGGGCATCCCAAAAACGTCAGGGTCGAAATATGGCTTTCAAATTAAGTTCTGAATTAGTGGATGCTGCCAAAGGTAGTGGCGATGCCATACGCAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTACA 381 0.4199 MGGSPKTRGIHAGGSFNRILKHGKKSLAYQILYRAMKNIQQKTETNPLSILRQAIRGVTPDSIPVEIGSAQGKALAIRWLLGASQKRQGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAT 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1310 127 PANTHER RIBOSOMAL PROTEIN S7 14 126 IPR000235 GO:0006412
Pvu1g1310 127 SUPERFAMILY Ribosomal protein S7 17 125 IPR036823 -
Pvu1g1310 127 MobiDBLite consensus disorder prediction 107 127 - -
Pvu1g1310 127 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 16 62 IPR000235 GO:0006412
Pvu1g1310 127 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 61 127 IPR000235 GO:0006412
Pvu1g1310 127 PANTHER 30S RIBOSOMAL PROTEIN S7, CHLOROPLASTIC 14 126 - -
Pvu1g1310 127 Gene3D Ribosomal protein S7 domain 6 125 IPR036823 -
Pvu1g1310 127 Coils Coil 123 127 - -
Pvu1g1310 127 Pfam Ribosomal protein S7p/S5e 17 125 IPR023798 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1310 Pvu-Chr1 35471556 35472053 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1310 22 125 Cytoplasmic Ribosomal Protein Gene Family AT3G11940 33.607 2.51e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1310 K02992 - twl:120011500 196.438