Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1307 ATGGGGATGGCTGCAGAGTCGCAGTTTCATGTGTTGGCTGTTGATGACAGCATCATAGATAGGAAACTCATTGAGAGGCTCCTCAGAACCTCTTCCTACCAAGTTACTACAGTTGATTCTGGTAGCAAGGCTTTAGAGTTTCTGGGGTTGCGTGAGAATGATAAGACCAACCCAAGTACACCATCTGTTTCTCCCAACAACAATAATCAGGTGGTGGAGGTGAATCTTGTTATTACAGATTACTGTATGCCTGGCATGACAGGCTATGACTTGCTTAAGAAAATCAAGGAATCTTCATCTTTGAGAAACATACCAGTTGTGATTATGTCATCTGAGAATGTGCCTTCAAGGATTAGCAGATGCTTGGAGGAAGGAGCAGAAGAATTTTTCTTGAAGCCTGTGAGGCTGTCAGATTTGAACAAGCTTAAACCCCACATGAAGAAGACCAAGTCGAAAGATCAAAAGCAAGGAACAGCTGAAAAGATTGAAAACTCAGAAGTTCTACAGCAACATGCCCAGCAAATCCTCCAAAATGACCAGAAACAAGCACCAAAACCCCAAGATCCTCAGCCAGAGTCAGAGTCAAAGCCACAACCAACTATAGAACAACAGCAACCATCACTACAACAAGCCAACAATAACAAGAGGAAGACCATGGAACAGGGGCTTTCACCTGAGACTGACAGAACAAGACCAAGATACAGTGGCATAGCCACTGTGGTATGA 726 0.4366 MGMAAESQFHVLAVDDSIIDRKLIERLLRTSSYQVTTVDSGSKALEFLGLRENDKTNPSTPSVSPNNNNQVVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHMKKTKSKDQKQGTAEKIENSEVLQQHAQQILQNDQKQAPKPQDPQPESESKPQPTIEQQQPSLQQANNNKRKTMEQGLSPETDRTRPRYSGIATVV* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1307 241 MobiDBLite consensus disorder prediction 173 241 - -
Pvu1g1307 241 MobiDBLite consensus disorder prediction 141 160 - -
Pvu1g1307 241 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 237 IPR045279 GO:0009736
Pvu1g1307 241 Pfam Response regulator receiver domain 11 141 IPR001789 GO:0000160
Pvu1g1307 241 SUPERFAMILY CheY-like 8 141 IPR011006 -
Pvu1g1307 241 SMART REC_2 9 143 IPR001789 GO:0000160
Pvu1g1307 241 MobiDBLite consensus disorder prediction 173 220 - -
Pvu1g1307 241 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9-LIKE 3 237 - -
Pvu1g1307 241 CDD REC_typeA_ARR 11 142 - -
Pvu1g1307 241 ProSiteProfiles Response regulatory domain profile. 10 147 IPR001789 GO:0000160
Pvu1g1307 241 Gene3D - 10 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1307 Pvu-Chr1 35340847 35342926 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1307 1 241 Response Regulator Gene Family AT3G57040 62.397 8.42e-98 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pvu1g1307 Response_reg 2.1e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1307 K14492 - gmx:100814494 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1307 1 35340847 35342926 Pvu1g1307 1 35340847 35342926 ECH