Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1254 ATGTTATCACATTCATCTACTATGATTGCAACAATTATTATTGTTCTTGTACAAACACTTGTGAGTGTGAGTTCACTTCCTGAAGCTGATAAAATTAGCAGTTTGCCAGGGCAGCCACATGTTAAATTTCAGCAATATTCTGGTTACATTACAGTAGATGACCAACATCAGAGAGCTTTGTTTTATTACTTTGTTGAAGCTCAAAAAGACCCTACTTCCAAGCCAGTAGTCCTCTGGTTGAATGGAGGTCCTGGTTGTTCATCTATTGGAGTTGGAGCTCTAATTGAGCATGGCCCTTTCAAACCGAGAGACAGTAATGTTCTTGTGAAAAATCATTATAGTTGGAACAAAGTGGCAAATGTGCTATACTTGGAATCACCTGCTGGTGTTGGATTTTCCTACTCTAGCAATACTTCTTTCTATACCCTGGTAACAGATGAAATTACAGCAAGGGATAATCTCGTTTTCCTACAACGCTGGTTCATTGAATTCCCTGAGTACTCCAATAACGACTTTTTCATTACTGGGGAGAGCTATGCCGGACACTATGCTCCACAACTTGCGCAACTTATTGTTCAAACCAAGACCAACATCAATCTCAAGGGAATAGCAATTGGGAATCCTCTTATGGAATTTGACACTGATTTGAACTCCAAAGCTGAATTCCTTTGGTCCCACGGACTGATTTCAGATTCAACTTACGGTCTCTTCACCAGAGTCTGCAACTACTCCACTATTAGGAGACAAATGATAAGTGGGAATCTTAGTGAAATTTGTGATAACATAAATACATTGGTGTTTACTGAGCTTAGCAACTACATAGACCAATATGATGTCACTCTTGATGTGTGTTTGTCATCAGCAAATCAACAGGCCTATGTGCTGAATCAAATGCAAAAGATACAGAAGATAGATGTTTGTGTGGATGATAAAGCAGTCAACTACTTAAACAGGAAAGATGTGCAGAAAGCTCTCCATGCGAAGCTTGTTGGAGTATCCAAATGGTTAACTTGCAGCAGGGTTCTCCACTATGACCGTACAAATCTAGAGATACCAACAATTTCTATTTTAGGATCACTTGTTAATTCCAAAATCAGGGTTCTGGTATATAGTGGAGATCAAGATTCAGTTATTCCATTAATGGGATCTCGTTCTTTGGTGAATGGATTGGCCAAGGAACTTGGACTGAATACAACAGTGGCGTATAGAGCCTGGTTTGAAGGAAAACAGGTAGGAGGATGGACACAAGTATACGGAGACATTTTATCTTATGCCACCATAAGAGGAGCATCTCATGAAGCTCCCTTTAATCAACCAAGGAGATCACTGGGGCTACTTAAAGCATTTCTTGAAGGAAAGCCACTGCCAGATGTTAAATAA 1380 0.3971 MLSHSSTMIATIIIVLVQTLVSVSSLPEADKISSLPGQPHVKFQQYSGYITVDDQHQRALFYYFVEAQKDPTSKPVVLWLNGGPGCSSIGVGALIEHGPFKPRDSNVLVKNHYSWNKVANVLYLESPAGVGFSYSSNTSFYTLVTDEITARDNLVFLQRWFIEFPEYSNNDFFITGESYAGHYAPQLAQLIVQTKTNINLKGIAIGNPLMEFDTDLNSKAEFLWSHGLISDSTYGLFTRVCNYSTIRRQMISGNLSEICDNINTLVFTELSNYIDQYDVTLDVCLSSANQQAYVLNQMQKIQKIDVCVDDKAVNYLNRKDVQKALHAKLVGVSKWLTCSRVLHYDRTNLEIPTISILGSLVNSKIRVLVYSGDQDSVIPLMGSRSLVNGLAKELGLNTTVAYRAWFEGKQVGGWTQVYGDILSYATIRGASHEAPFNQPRRSLGLLKAFLEGKPLPDVK* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1254 459 Gene3D - 354 452 - -
Pvu1g1254 459 Gene3D alpha/beta hydrolase 27 286 IPR029058 -
Pvu1g1254 459 PANTHER CARBOXYPEPTIDASE 7 457 - -
Pvu1g1254 459 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 7 457 IPR001563 GO:0004185|GO:0006508
Pvu1g1254 459 Gene3D - 307 344 - -
Pvu1g1254 459 Pfam Serine carboxypeptidase 37 452 IPR001563 GO:0004185|GO:0006508
Pvu1g1254 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Pvu1g1254 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Pvu1g1254 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Pvu1g1254 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 422 435 IPR001563 GO:0004185|GO:0006508
Pvu1g1254 459 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Pvu1g1254 459 SUPERFAMILY alpha/beta-Hydrolases 33 456 IPR029058 -
Pvu1g1254 459 ProSitePatterns Serine carboxypeptidases, histidine active site. 422 439 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1254 Pvu-Chr1 34069405 34071982 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1254 312 455 Calmodulin-binding Proteins AT2G22960 28.571 2.40e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1254 K16297 - gmx:100793889 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1254 1 34069405 34071982 Pvu1g1254 1 34069405 34071982 ECH