Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu1g1252 | ATGCTCTTCCTTGAGTCTGATCATTACAAACTCTTGACCCTTCACAACACCTTTGCTACCAACTCAGTGACCATTTCACAACTTCATTTCTTTTCCTTCCTGAAACAAATGGCATCCAGTTCAATCTCAGCCTCAGGTTCATGGAGTGTTAAGGACAACAAGGCCTTTGAGAAGGCTCTAGCTGTTTATGACAAGGACACCCCTGACCGTTGGTACAATGTTGCCCATGCTGTTGGTGGCAAAACTCCAGAGGAAGTCAAGAGACACTACGAACTCCTTGTCCAGGATGTTAAGCATATTGAGTCAGGACGAGTGCCATTCCCAAACTACAAGAAAACTGCAGCCTCTGATCAGGAGGAGAAAAGGCTGAGGAATTTGAACCTCCAGTGA | 390 | 0.4564 | MLFLESDHYKLLTLHNTFATNSVTISQLHFFSFLKQMASSSISASGSWSVKDNKAFEKALAVYDKDTPDRWYNVAHAVGGKTPEEVKRHYELLVQDVKHIESGRVPFPNYKKTAASDQEEKRLRNLNLQ* | 130 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu1g1252 | 129 | ProSiteProfiles | Myb-like domain profile. | 46 | 94 | IPR001005 | - | |
Pvu1g1252 | 129 | SUPERFAMILY | Homeodomain-like | 46 | 102 | IPR009057 | - | |
Pvu1g1252 | 129 | SMART | sant | 44 | 96 | IPR001005 | - | |
Pvu1g1252 | 129 | CDD | SANT | 54 | 94 | IPR001005 | - | |
Pvu1g1252 | 129 | Gene3D | - | 38 | 107 | - | - | |
Pvu1g1252 | 129 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR-RELATED | 37 | 129 | IPR044636 | GO:0003700 | |
Pvu1g1252 | 129 | ProSiteProfiles | SANT domain profile. | 43 | 98 | IPR017884 | - | |
Pvu1g1252 | 129 | PANTHER | TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED | 37 | 129 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu1g1252 | Pvu-Chr1 | 33981178 | 33982220 | Dispersed/Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Pvu1g1252 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu1g1252 | - | - | gmx:100818368 | 177.563 |