Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1246 ATGGCATCAAGAATCACCGTTAAACAACAGGGCACAGACGAAGCAGTAGTGGAGGGAGGGAAACAGCAGAAGAAGAAAGGTGTAGCGAATGGAAGGAACCGCAAGGCATTAGGTGATATTGGGAATTTGGCCAATGTAGGAGAAGTTGAAGTCAAGCCTAATCGCCCCATCACAAGGAGTTTTGGAGCTCTGCTACTTGCCAACGCACAAGCAGAAGCAGCAGCAGCTGCTGATAAGAATAAGAAAAACAAGGTTTCTGCCAATGTGGCTGGACCTCCACCTGTTTCTAATGCAGTTGCAGTGACCAAAAGAGTGGTCCATAAACGGTGTCAGAAGAAAGTCGCTGTAAAACCAAAACCTAAGAAGGCCATTGACAAGGAAGCTATCCCAGATGAGGAGATCCAGAAAGAAAAGAAAAGGGAAGGAGATGACAACTCCAAGAAAACACACGCTTTTACTTCAGTGCTCACAGCTCGAAGCAAGGCAGCGTGCGGCATAACTAACAAACCGAAGGAGCAGATTATTGACATTGATGCTGGTGATGTCGACAATGAGCTTGCTGCTGTGGAGTATATTGATGACCTTTACAGGTTCTATAAGCTTTTTGAGAATGAGAACCGCCCTCATGACTACATAGACTCACAACCTGAGATAAAGGAGAGGTCGAGAGCTATATTAGTTAATTGGCTGATAGATGTCAACACCAAATTTTACCTTTCACTTGAGACCCTTTACTTGACAATCAATATAATTGATCGGTTCCTGTCAGTTAAGAGTATTCCAAGTTGTAGGGAACTGCAATTGGTTGGCATCAGTGCCATGCTGATGGCATCCAAGTATGAAGAAATCTGGCCCCCTCAGGTTGAGGATTTTGTCTGCCTTACAACTTACACTCATGAACAGATACTGGTCATGGAGAAAACAATACTAGGTAATCTGGAATGGACTTTGACAGTCCCAACATCTCTTGTTTTTCTGATTCGTTTTATCAAGGCAACAGTCCCAGATCAGGAGTTGGAAAACATGGCTCATTTTCTGTCTGAGTTGGGATTGGTGCACTATGCCACCGTAATGTATTGCCCATCAATGGTTGCTGCCTCAGCAGTCTTTGCAGCTAGATGCACTCTGAATAAGATTCCCCTTTGGAACGAGACACTTGAGCTGCACACGGGTTATTCACTAGAACAACTTATGGAATGTGCTAGATTATTGGTGAGTTTCCACTCCATGGTTGGGAATGAAGAGCTGAAGGTAGTGTACAGAAAGTATTCTGATCCTCAGAAAGGAGCTGTTGCTATGCTCCCACCAGCTAAAAATCTTCTGCCTGAAGGTTTTGTCCCTCAATAG 1347 0.4425 MASRITVKQQGTDEAVVEGGKQQKKKGVANGRNRKALGDIGNLANVGEVEVKPNRPITRSFGALLLANAQAEAAAAADKNKKNKVSANVAGPPPVSNAVAVTKRVVHKRCQKKVAVKPKPKKAIDKEAIPDEEIQKEKKREGDDNSKKTHAFTSVLTARSKAACGITNKPKEQIIDIDAGDVDNELAAVEYIDDLYRFYKLFENENRPHDYIDSQPEIKERSRAILVNWLIDVNTKFYLSLETLYLTINIIDRFLSVKSIPSCRELQLVGISAMLMASKYEEIWPPQVEDFVCLTTYTHEQILVMEKTILGNLEWTLTVPTSLVFLIRFIKATVPDQELENMAHFLSELGLVHYATVMYCPSMVAASAVFAARCTLNKIPLWNETLELHTGYSLEQLMECARLLVSFHSMVGNEELKVVYRKYSDPQKGAVAMLPPAKNLLPEGFVPQ* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1246 448 CDD CYCLIN 222 310 IPR013763 -
Pvu1g1246 448 SUPERFAMILY Cyclin-like 319 438 IPR036915 -
Pvu1g1246 448 MobiDBLite consensus disorder prediction 1 35 - -
Pvu1g1246 448 MobiDBLite consensus disorder prediction 116 147 - -
Pvu1g1246 448 SMART cyclin_7 324 406 IPR013763 -
Pvu1g1246 448 SMART cyclin_7 228 311 IPR013763 -
Pvu1g1246 448 Pfam Cyclin, C-terminal domain 320 436 IPR004367 -
Pvu1g1246 448 SUPERFAMILY Cyclin-like 183 317 IPR036915 -
Pvu1g1246 448 Pfam Cyclin, N-terminal domain 197 317 IPR006671 -
Pvu1g1246 448 ProSitePatterns Cyclins signature. 223 254 IPR006671 -
Pvu1g1246 448 PANTHER CYCLINS 21 442 IPR039361 -
Pvu1g1246 448 PIRSF Cyclin_A_B_D_E 1 446 IPR039361 -
Pvu1g1246 448 PANTHER G2/MITOTIC-SPECIFIC CYCLIN S13-6 21 442 - -
Pvu1g1246 448 SMART Cyclin_C_2 320 437 IPR004367 -
Pvu1g1246 448 Gene3D - 194 433 - -
Pvu1g1246 448 Gene3D - 208 318 - -
Pvu1g1246 448 MobiDBLite consensus disorder prediction 118 147 - -
Pvu1g1246 448 CDD CYCLIN 318 405 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1246 Pvu-Chr1 33696571 33699371 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1246 1 441 Core Cell Cycle Gene Families AT4G37490 50.769 1.35e-138 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1246 K21777 - gmx:547919 613.224