Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1241 ATGACCGAGTCAATGCATGCCGTGGAACCGTCGTCAGAGGCGGCGGAGCTGCTGGCCTCCGATCCCTTGTTCGACGAGTTCTCTGCCGAGTTTGGTTCCCTCCCCTTTCTGTCCATGGACTCGCTCTTCAACTCCGACACGCTTCCCTTCGCCTCAGATCTTGAATTCGGCATGGATTTTGATGACAACAATGGGGAGTTCGAAATCACCTTCGACGATCTCGACGACATCTGCATTCCCTCCGACGCCGAGGACTTCCTTCTTACTGACGCATGTAACCCCGACAACACCTCCGTTTTGGGGCCGATTGAGGAATCTTCCGCGAAGAATTCCGATTCTCCGCGTTCTGACGCATCTGTGGTTTCTGGAGATCGGAGCTCCGGCGTTTCAAGGTTTTTCAATTCGCAAGCGTCGGATTCTGTTTCTGAGGGTAATTCGTGCAAAGAAGGTTCGCTTGACGCGGTTGATGTTAGGGTTTCGAACATTCCCTCGCCGGAGTCTGAATTTTGCGACCGGGAGGAGTCTTCTAGTGGACCGGTTTCGTCTCAGGGTTCAGGAAATGCTGGATCGGGTGTGTATGAGGCCATAAACTCGCCCTCGCCTGATTCTGTATCTTTCGAGAGGGACATAACATCGTCTCATGCACATGAAGTTATGGACAAGGGTGTGAAATTGGAGGAAATTTCAGGGTGTGATCTGAAGAGGAAGAAAGAGAGTTGTGAAGGAAGTGCTACCAAGCACAGAAGGTTCTCTTCCTCCTCGGTGGATACTAAGACCGAGAAACAGACTCCGTCTGATGTGAATGCAATTGATGATGATGATGAGAAAAGGAAGGCAAGGTTGATGAGGAATAGGGAAAGTGCACAGCTTTCTAGGCAGAGGAAGAAGCATTATGTGGAGGAGCTTGAGGAGAAAGTGAGATCAATGAATTCCATCATTGCTGATCTGAGTAGCAAGATTTCATACATGGTGGCTGAGAATGCTACACTTAGACAGCAAGTGGGTGCTGGTGTGATGTGTGCTCCTCCACCACCTGCTCCTGGGATTTACCCTCATCCTCCAATGGCACCCATGCCTTATCCTTGGATGCCTTGTGCTCCCTATGTTGTCAAGCCTCAAGGATCTCAGGTTCCTTTGGTACCCATTCCTAGGTTGAAGCCTCAGCAGCATACTTCAGCACCCAAAGGTAAAAAGTCCGAGAGTAAGAAGAGTGAGGGGAAAACTAAGAAGGTTGCTAGTATTAGTTTCTTAGGTTTGTTTTTCTTTATCATGCTTTTTGGTGGGCTTGTTCCTCTTGTGGATTTTAAGTTTGGCGGTTTAGTGGACAATGTTCCTGATACTGGTCTATCTAGCTATGTTAGTGATAGGGTGCATGGTCATGGTGGAGGTAAGGTTTGGTCTGTGAATGGTCCTAGGAATGGGTCTGAAAGAGATGAGGAAGTAGGGTTTTCTAATGAGAGGTTTAGTGTTAAAGACAAAATGAATTACGAGAGAGGCCGGCATTTAGGAGAAGAAAGGGGTGAACGGCAGGGCCCTGATGATTTTGGTCGCCAGGGAAATGCCAGCGAACCTCTTGTTGCTTCTTTGTATGTTCCCAGGAATGATAAGATGGTGAAGATTGATGGAAACTTAATTATCCATTCCATTATGGCTAGTGAAAAAGCTATGGCATCTCAAACTGCAGAGGCAAAGGAGAAGAAAGAAACAGGTTTGGCCATTCCTAAGGATTCGGATTCTGCATTGGCTATTCCTGAAGTTGGAAGACTAAGAGGTCAACATCCACATGTGTATAGGGTTCCTGCGGAACAGAGGAAGGCTCTTGGCTCTGGTTCAACCAAAGCTTTGAAGGACCATATGAAGTCCTCTGCAACTGATGGTAAAATGCAACAGTGGTTCCGTGAAGGTCTTGCAGGGCCAATGTTAAGTTCTGGCATGTGCACTGAAGTTTTCCAGTTTGATGTTTCTCCTAGTCCTGGAGCTATAGTTCCTGCGACATCAGTTGCCAATTTGTCAACCGAAAAGCGTCAGAATGCTACCTCGGTCAAAAAGACCAGGAATAGAAGAACCCTTCATGGGCTTCCAGATTCTCTTACTGGATCGAGTCTGAACATAACAGAAGAACATGTAAAAAACTTGCAGAAAGACCACCTCCATGGTAATGAATCTTCTATGGTGGTTTCAGTCCTTGTTGATCCCAAAGAGGCTGGTGATGGTGATGTTGATGTCGATGGCATGATGAGACCAAAGTCACTCTCTCGAATATTCGTGGTTGTGCTAATTGATAGTGTCAAGTATGTCACTTACTCTTGCGGTCTGCCTCGTGCTTCTCCCCATTTG 2337 0.472 MTESMHAVEPSSEAAELLASDPLFDEFSAEFGSLPFLSMDSLFNSDTLPFASDLEFGMDFDDNNGEFEITFDDLDDICIPSDAEDFLLTDACNPDNTSVLGPIEESSAKNSDSPRSDASVVSGDRSSGVSRFFNSQASDSVSEGNSCKEGSLDAVDVRVSNIPSPESEFCDREESSSGPVSSQGSGNAGSGVYEAINSPSPDSVSFERDITSSHAHEVMDKGVKLEEISGCDLKRKKESCEGSATKHRRFSSSSVDTKTEKQTPSDVNAIDDDDEKRKARLMRNRESAQLSRQRKKHYVEELEEKVRSMNSIIADLSSKISYMVAENATLRQQVGAGVMCAPPPPAPGIYPHPPMAPMPYPWMPCAPYVVKPQGSQVPLVPIPRLKPQQHTSAPKGKKSESKKSEGKTKKVASISFLGLFFFIMLFGGLVPLVDFKFGGLVDNVPDTGLSSYVSDRVHGHGGGKVWSVNGPRNGSERDEEVGFSNERFSVKDKMNYERGRHLGEERGERQGPDDFGRQGNASEPLVASLYVPRNDKMVKIDGNLIIHSIMASEKAMASQTAEAKEKKETGLAIPKDSDSALAIPEVGRLRGQHPHVYRVPAEQRKALGSGSTKALKDHMKSSATDGKMQQWFREGLAGPMLSSGMCTEVFQFDVSPSPGAIVPATSVANLSTEKRQNATSVKKTRNRRTLHGLPDSLTGSSLNITEEHVKNLQKDHLHGNESSMVVSVLVDPKEAGDGDVDVDGMMRPKSLSRIFVVVLIDSVKYVTYSCGLPRASPHL 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1241 779 MobiDBLite consensus disorder prediction 496 513 - -
Pvu1g1241 779 Coils Coil 299 319 - -
Pvu1g1241 779 MobiDBLite consensus disorder prediction 384 407 - -
Pvu1g1241 779 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 38 779 - -
Pvu1g1241 779 MobiDBLite consensus disorder prediction 236 268 - -
Pvu1g1241 779 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 38 779 - -
Pvu1g1241 779 CDD bZIP_HY5-like 277 328 - -
Pvu1g1241 779 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 274 334 IPR004827 GO:0003700|GO:0006355
Pvu1g1241 779 MobiDBLite consensus disorder prediction 174 207 - -
Pvu1g1241 779 MobiDBLite consensus disorder prediction 98 126 - -
Pvu1g1241 779 Gene3D - 274 336 - -
Pvu1g1241 779 SMART brlzneu 272 336 IPR004827 GO:0003700|GO:0006355
Pvu1g1241 779 MobiDBLite consensus disorder prediction 393 407 - -
Pvu1g1241 779 SUPERFAMILY Leucine zipper domain 276 334 IPR046347 GO:0003700|GO:0006355
Pvu1g1241 779 Pfam bZIP transcription factor 276 334 IPR004827 GO:0003700|GO:0006355
Pvu1g1241 779 MobiDBLite consensus disorder prediction 236 255 - -
Pvu1g1241 779 MobiDBLite consensus disorder prediction 163 207 - -
Pvu1g1241 779 MobiDBLite consensus disorder prediction 496 520 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1241 29 779 bZIP Transcription Factor Family AT2G40950 47.712 6.97e-169 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu1g1241 bZIP_1 8.9e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1241 K25783 - gmx:100101871 1111.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1241 1 33637575 33640705 Pvu1g1241 1 33637575 33640705 ECH