Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1232 ATGAAATACTTATTCCTATCCCTGGAAAGCTTATCACTGGGACAGTGTGTAGCCATTCATCAATATCTGCATATGGAGCTCTTCTCCTTCCTTTTCCTTGCCCTTCTCTTCACTCTCTATCTCTATTTTGCTACACAAAAACCCTGTAAAACCAACACCAAAGGCTTCAAAGACTACCCTCTCATTGGAACCTTACCGGAATTCCTCCAAAACCGCCATCGCTTCCTCGATTGGACCACCCAAGTCCTCCGCGACTGCCCAACCAACACCGCCGTCTTCTCCCGCCCCTACAGCTCCCATGGCGTCATAACGGCCAACCCTGACAACGTCGAGCACATGCTAAAAACCCGATTCGAAAACTACCCAAAGGGCGAACGCTTCATCAACCACCTTCAAGACTTCCTCGGCAACGGAATCTTCAACTCCGACAGTGAACTCTGGAAGTTGCAGCGAAAAATTGCCAGCCACGAGTTCAGCACCAAATCACTTCGTAACTTCATTGTCAACACCGTCACCACCGAACTCCAAACCCGGCTTCTTCCAATTCTCTCCAAAGCCTCCCAGACAAACGGGCTCCTCGATTTGCAGAACCTGTTCGAGCGCTTCGCCTTCGACAACGTCTGCAAGCTAGCTTTCAACGTCGACCCCGCCTGTCTCGGCGGTGACGGCACCGCCGGTGCAGAGTTCATGAGCGCATTCGAGGACGCCGCCGTACTGAGTTCAGGGAGATTCATGAGCGTGTTACCCTTCATGTGGAAAATAAAGCAGCTGCTGAACATCGGAACAGAACGGAGACTCAGAAAATCAATCACTACCGTGCACGTGTTCGCCGACTCCATCATACGGTCCCGATTGGAATCCAGGGAGCACACCAGCGACGACGAAGATTTACTTTCACGTTTCATCAGAACGCAGGAAAGCTCGCCGGAGTTTCTCCGCGACGTTGTGATAAGTTTCATTCTCGCTGGGCGTGACACGACGTCGTCCGCACTCACCTGGTTCTTCTGGATTCTTTCTTCCAGACCTGACGTTCGGAGAAAAATTCACGACGAAATCGCAAGGGTTCGGTTCGCGACGGGTGGCGTTGGCGCGTTCGGGTACGAGGAGCTGAAAGAGATGCATTACTTGCATGCGGCGCTTACGGAGACGATGAGGTTGTACCCGCCGGTGCCAGTTGACTCGAAGAAATGTGCGGACGACGACGTTTTACCGGATGGAACGAGGATTGGGAAGGGGTGGTTCCTATCGTACCACACCTACGCTATGGGGAGAATGGAGAGCGTATGGGGAAAAGACTGTGCCCAATATAATCCCGAAAGGTGGTTGGAGAATGGCGCATTCCGAACGGAGAGTCCGTTTCGTTTTCCGGTGTTTCACGCTGGTCCACGAATGTGTCTGGGAAAAGAAATGGCTTATATTCAGATGAAGTCCATTGCAGCTTCGGTGATGGAGAGCTTCGAGATCGAGGCAGTGGATAAGGACACGTGTCCAGAACATGTGCTTTCTTTGACGTTGAGGATCAAAGGAGGGTTGGCCGTCAGGTTAAGGACAAGGGATACGCAAAGTGTCCACCCTAACACCAGGGTCTAG 1590 0.5201 MKYLFLSLESLSLGQCVAIHQYLHMELFSFLFLALLFTLYLYFATQKPCKTNTKGFKDYPLIGTLPEFLQNRHRFLDWTTQVLRDCPTNTAVFSRPYSSHGVITANPDNVEHMLKTRFENYPKGERFINHLQDFLGNGIFNSDSELWKLQRKIASHEFSTKSLRNFIVNTVTTELQTRLLPILSKASQTNGLLDLQNLFERFAFDNVCKLAFNVDPACLGGDGTAGAEFMSAFEDAAVLSSGRFMSVLPFMWKIKQLLNIGTERRLRKSITTVHVFADSIIRSRLESREHTSDDEDLLSRFIRTQESSPEFLRDVVISFILAGRDTTSSALTWFFWILSSRPDVRRKIHDEIARVRFATGGVGAFGYEELKEMHYLHAALTETMRLYPPVPVDSKKCADDDVLPDGTRIGKGWFLSYHTYAMGRMESVWGKDCAQYNPERWLENGAFRTESPFRFPVFHAGPRMCLGKEMAYIQMKSIAASVMESFEIEAVDKDTCPEHVLSLTLRIKGGLAVRLRTRDTQSVHPNTRV* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1232 529 Gene3D Cytochrome P450 39 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g1232 529 PANTHER CYTOCHROME P450 35 516 - -
Pvu1g1232 529 Pfam Cytochrome P450 56 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g1232 529 PANTHER CYTOCHROME P450 94B3-LIKE 35 516 - -
Pvu1g1232 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Pvu1g1232 529 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g1232 529 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g1232 529 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g1232 529 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g1232 529 SUPERFAMILY Cytochrome P450 57 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g1232 529 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g1232 529 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g1232 529 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g1232 529 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g1232 529 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1232 Pvu-Chr1 33408200 33410036 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1232 55 518 Cytochrome P450 AT3G56630 62.260 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1232 - - pvu:PHAVU_001G118600g 1055.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1232 1 33408200 33410036 Pvu1g1232 1 33408200 33410036 ECH