Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1229 ATGAACATAAATGGGTGCAACGTTTTTCACTTAGGAGACACAAACAACATCAAGTGTTCTTCCTCTGTACACAACTCTGTTCCTAGTTCAGAGTACCGTCCTTTACCTCGTACACCTCAAAGAGAGAAAAAAATGGAAGGAGATGGTTATTGTGGGAGTTTCTTTCAGAGGTGTAAGCCTTACATAGCTATGATTTCTCTGCAATTCGGGTTTGCGGGTATGAACATAATCACTAAGGTTTCCCTCAACCGTGGGATGAGCCACTATGTGCTTGTGGTGTATAGACATGCCTTTGCTACTGCGGCTATTGCCCCTTTTGCTCTTGTTCTTGAGAGGAAAGTGAGGCCCAAGATTACATTTCTTATGTTCATGCAAATATTCGTGTTGGGTCTACTTGGGCCTGTGATTGATCAGAACCTATACTATGCGGGGTTGAAATTTACTTCCCCTACCTACTCATGTGCAATAAGCAACATGCTCCCTGCAATGACATTTGTGATGGCTGCTATTTTCAGGATGGAAAAGGTGGACATAAGAAAATTTAGATGCCAAGCAAAAGTTATAGGAACTATAGTAACAGTTGCTGGGGCCATGTTGATGACATTGTACAAAGGGCAAGTCATCAGTTTCTTGGGTTCTGAGTACATGCATCACCCCAGAAATTATGTTCCTGAAAACACCACTGATTCTGGTGAAAAGGACTGGTTCAAGGGCTCTATTCTTCTCATAATTGCCACCCTTGCTTGGGCTTCTTTCTTCATCCTTCAGGCAGTGACACTAAGGAAATACCCTGCTCAGCTCTCTCTCACAGCACTTGTGTGTGCCTTAGGTACACTGCAGTCAATTGCCGTTACCTTTGTCATGGAGCACAAGACATCTGTTTGGACCATTGGCTGGGATATGAACCTTCTTGCAGCAGCCTATGCTGGAATAATATCATCAGGAATCACCTACTATGTTCAAGGGATTGTCATGCAAAAGAAAGGGCCTGTTTTTGTAACTGCTTTCAGCCCTTTTATGATGATTATCGTAGCCATCATGGGTGCTTTCATCCTCGCAGAAAAAATATACCTTGGAGGGGTCGCAGGAGCTGTTCTCATAGTAATGGGACTTTACTCGGTTCTGTGGGGAAAATACAAGGAGAACAAGGAGAAAGAAGAGGAGATAACAATTGAGGTGACGAAGTGTTGTTCAGAAAATGGGAGATTGGAGACTGTGGTGGAAGATGGTGAAACAAACAACGATATTGAGATGCAAAAGGGTGAAGAAGCCTCCAGAGAGTTAAGGGTAGCCATTGTTGTTCCAAAAGTTTAA 1314 0.4315 MNINGCNVFHLGDTNNIKCSSSVHNSVPSSEYRPLPRTPQREKKMEGDGYCGSFFQRCKPYIAMISLQFGFAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFALVLERKVRPKITFLMFMQIFVLGLLGPVIDQNLYYAGLKFTSPTYSCAISNMLPAMTFVMAAIFRMEKVDIRKFRCQAKVIGTIVTVAGAMLMTLYKGQVISFLGSEYMHHPRNYVPENTTDSGEKDWFKGSILLIIATLAWASFFILQAVTLRKYPAQLSLTALVCALGTLQSIAVTFVMEHKTSVWTIGWDMNLLAAAYAGIISSGITYYVQGIVMQKKGPVFVTAFSPFMMIIVAIMGAFILAEKIYLGGVAGAVLIVMGLYSVLWGKYKENKEKEEEITIEVTKCCSENGRLETVVEDGETNNDIEMQKGEEASRELRVAIVVPKV* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1229 437 SUPERFAMILY Multidrug resistance efflux transporter EmrE 281 380 - -
Pvu1g1229 437 PANTHER WAT1-RELATED PROTEIN 54 407 IPR030184 GO:0016021|GO:0022857
Pvu1g1229 437 Pfam EamA-like transporter family 61 201 IPR000620 GO:0016020|GO:0016021
Pvu1g1229 437 Pfam EamA-like transporter family 237 375 IPR000620 GO:0016020|GO:0016021
Pvu1g1229 437 SUPERFAMILY Multidrug resistance efflux transporter EmrE 94 204 - -
Pvu1g1229 437 PANTHER WAT1-RELATED PROTEIN 54 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1229 Pvu-Chr1 33145451 33148196 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1229 45 424 Nodulin-like Gene Family AT5G07050 62.953 2.02e-171 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1229 - - pvu:PHAVU_001G118300g 832.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1229 1 33145451 33148196 Pvu1g1229 1 33145451 33148196 ECH