Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1225 ATGGCTCTGCTTCTGATTATACCCTTATCACTCATCACCCTCTGGGTAGGTTTCACGCTGTACCAGAGGCTAAGGTTCAAGCTGCCTCCGGGTCCACGGCCCTTGCCGGTAGTCGGTAACCTCTACGACATAAAGCCGGTCCGGTTCCGGTGCTTCGCGGAGTGGGCCCAGTCCTACGGGCCCATCATATCGGTGTGGTTCGGCTCCACGCTCAACGTCATCGTTTCGAACTCCGAGCTCGCAAAGGAGGTGCTGAAGGAACAGGACCAGCACCTCGCTGACCGCCACCGCAGCCGATCGGCGGCGAAGTTCAGCCGCGACGGCAAGGATCTCATTTGGGCCGATTATGGACCCCACTACGTGAAAGTGAGGAAGGTCTGCACGCTAGAGCTCTTCACCCCCAAACGTCTCGAGGCCCTCAGGCCCATTAGGGAAGACGAGGTCACTGCCATGGTTGAGTCCATTTTCCACCACTGCACCTCTACTGAGAATTTGGGGAAGGGAATATTGGTGAGGAAGTTCTTGGGGGAAGTGGCATTCAACAACATCACGAGGTTGGCATTTGGGAAAAGATTTGTGAACTCAGAAGGTGTAATAGACGAACAAGGAGTGGAATTCAAGGGCGTTGTAGAAAATGGGTTAAAACTGGGAGCATCTCTGGCCATGGCAGAACACATCCCTTGGCTGCGCTGGATGTTCCCTCTCGAAGAAGAGGCTTTTGCCAAGCATGGAGCTCGCCGTGACAGACTCACCAGAGCCATCATGGAAGAGCACACCGAAGCACGCAAGAAATCTGGTGGGGCCAAGCATCATTTTGTTGATGCCCTCCTCACATTGCAGGACAAATATGACCTTAGTGAAGACACCATCATTGGCCTCCTTTGGGACATGATCACAGCAGGGACGGACACATCTGCAATCTCTGTGGAATGGGCAATGGCCGAGTTAATAAGAAACCCAAGAGTGCAGCAAAAGGCTCAAGAGGAGCTAGACAAGGTGATTGGGCTTGTAAGGGTGATGACTGAAGCAGACTTCTTAAGCCTGCCATATCTGCAATGTGTGGCGAAGGAGGCAATGAGGCTCCACCCACCAACACCACTAATGCTCCCACACAGAGCAAATGCCGATGTAAAAGTTGGAGGGTATGACATCCCCAAAGGGTCCAATGTGCATGTGAATGTGTGGGCAGTGGCCCGTGACCCGGCCGTGTGGAAGGAGCCGTTGGAGTTCCGACCGGAGAGGTTTCTTGAGGAGGATGTGGACATGAAAGGCCATGACTATAGACTGCTTCCATTCGGGGCGGGTCGTCGGGTTTGCCCGGGTGCCCAACTCGGAATAAACTTAGTGACTTCCATGTTGGGCCACCTTTTGCACCATTTCTGTTGGAGTCCAGGTGAGGGAATGAAGGGTGAAGATATTGACATGGGTGAGAGTCCTGGGTTGGTCACATACATGAGGACACCACTAAAAGCTGTGGCTTCTCCTAGGCTCCCTTCACACTTGTACAAACGTCTACCTGCTGAGATTTAA 1530 0.532 MALLLIIPLSLITLWVGFTLYQRLRFKLPPGPRPLPVVGNLYDIKPVRFRCFAEWAQSYGPIISVWFGSTLNVIVSNSELAKEVLKEQDQHLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFTPKRLEALRPIREDEVTAMVESIFHHCTSTENLGKGILVRKFLGEVAFNNITRLAFGKRFVNSEGVIDEQGVEFKGVVENGLKLGASLAMAEHIPWLRWMFPLEEEAFAKHGARRDRLTRAIMEEHTEARKKSGGAKHHFVDALLTLQDKYDLSEDTIIGLLWDMITAGTDTSAISVEWAMAELIRNPRVQQKAQEELDKVIGLVRVMTEADFLSLPYLQCVAKEAMRLHPPTPLMLPHRANADVKVGGYDIPKGSNVHVNVWAVARDPAVWKEPLEFRPERFLEEDVDMKGHDYRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFCWSPGEGMKGEDIDMGESPGLVTYMRTPLKAVASPRLPSHLYKRLPAEI* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1225 509 Gene3D Cytochrome P450 22 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g1225 509 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g1225 509 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g1225 509 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g1225 509 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 502 - -
Pvu1g1225 509 PANTHER CYTOCHROME P450 98A3 4 502 - -
Pvu1g1225 509 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g1225 509 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g1225 509 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g1225 509 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g1225 509 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g1225 509 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g1225 509 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g1225 509 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g1225 509 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g1225 509 Pfam Cytochrome P450 29 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu1g1225 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Pvu1g1225 509 SUPERFAMILY Cytochrome P450 29 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1225 Pvu-Chr1 33062004 33066300 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1225 5 509 Monolignol Biosynthesis Gene Families AT2G40890 78.614 0.0 859
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1225 K09754 - gmx:100811080 940.258