Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1220 ATGGGAAAGGGCGAAGAAGAACAACAGCCTCTGCCTCCGTCCGAGGATTCGCCGCGTAATGCGGAGTGTCGGTGCCACTGTTCTCGGATTCAGAAGCTTGTCGGCGCCAGATGCATCCTCGTACTGGTCATGTCGGTCGCGCTGTTTCTCTCCGCGGCGTTTTGGTTGCCCCCTTTTCTGAGCCTCGCAGATCGGAGGAACCTGCATGGAGGTTCCAGATTCAAAGATCATGATATTGTTGCAAGCTTTATCGTCAATAAATCTGTTTCTTTGCTAGAAGATAACAAGTTTCAGCTGGCAGATGAAATTTTTGATGAGATTGATGCTCCCTCTAGCAAAGTAGCTGTCGTGTCTCTAGAATCCTTACCTGGGCCAAACAAGACAAGAGTGGTTTTTGCAGTTGATTCTGAAGATAAAGACACAGAAATGTCCTCAGCTGTCATCAGTTTGATAAGAGCATCATTTACATCCCTGGTTATACGCCAATCAATTCTCCAGCTTACTTCTTCATCCTTGTTTGGAGATCCCTACTCTTTTGAAGTGCTGAAATTGAAGGGAGGAATTACTATAATTCCACAACAGAATGCATTTCCTCTGCAGAAAGGGCAAGCAAAATTCAGCTTTAAATTAAATTTCCCCATTTATCAAATACAATCCAATTTTAAGGAGCTGACTAGTCAGCTAAAGTCTGGATTATATTTGACATCCTTTGAGAACTTGTATATCAGCTTATCGAATTCTGAAGGTTCAACAGTTGACGCTCCTACTGTTGTCCAGTCAACAGTTCTACTTGCAGTTGGGATTGCTCCTTCGGAAGAGAGGCTAAAGAAACTGGCACAAACCATCATGGGACCACATAATCTAGGCTTGAATCACACTGAATTTGGTAGGGTTAAGCAGGTCCGACTTTCATCTGTCTTGCAACACTCCCTTCATGGAAATGATGGTAGTGGCTCTGCATGGTCACCTTCTCCTGCTCCTCTGCCACATCCTCCACACCACCACCACCATCATCAACACCGGCATCATCATCATCACCATGATGCCCATCTTTCTCCTGCATTTTCTCCTATACCTGAGTCTATACATGTACCTGCACCAGCACCAGCACCTACACCAACACCTACACCTAGACACGCACTTACACATACACCTACACCTACGCCTCCATCCACGCCCAGGAAGGGTGTGACTCCACCCAAGGTTGGTTCTCCTACTGTGGCAAAAATTGCACCTGCACCTGCACCGGGGGAAAATTCTCAATCTCAGCCTCCTAATTGTCGATTTGGTTTTAGAAAAAGGTCTACCCATACTTCTGGGAAGCACGCTCATCCTCCAACACCTGCAGTTGCCCCCACTATTAATCCACATCATCCTGTTCATGTTGCATCACCAAAATCGCATATTGATCCCCCCACACATGTCTCTCATTCAGAACCTGCCTTGAGTCCTTTACCGAATGTAGCTTTTGCTCATGCTGAGCCCCCTCCTAAGAATGAACTTGCCCCAGAACATTATTACACGCATATTCCTGGGCTATCATCATCTTCTGCAGGTTGTCTTGGAACTGCTAAATGGTCATTTTTAATGCTTATAGTACTTGTGTTACGGGTATAA 1617 0.4564 MGKGEEEQQPLPPSEDSPRNAECRCHCSRIQKLVGARCILVLVMSVALFLSAAFWLPPFLSLADRRNLHGGSRFKDHDIVASFIVNKSVSLLEDNKFQLADEIFDEIDAPSSKVAVVSLESLPGPNKTRVVFAVDSEDKDTEMSSAVISLIRASFTSLVIRQSILQLTSSSLFGDPYSFEVLKLKGGITIIPQQNAFPLQKGQAKFSFKLNFPIYQIQSNFKELTSQLKSGLYLTSFENLYISLSNSEGSTVDAPTVVQSTVLLAVGIAPSEERLKKLAQTIMGPHNLGLNHTEFGRVKQVRLSSVLQHSLHGNDGSGSAWSPSPAPLPHPPHHHHHHQHRHHHHHHDAHLSPAFSPIPESIHVPAPAPAPTPTPTPRHALTHTPTPTPPSTPRKGVTPPKVGSPTVAKIAPAPAPGENSQSQPPNCRFGFRKRSTHTSGKHAHPPTPAVAPTINPHHPVHVASPKSHIDPPTHVSHSEPALSPLPNVAFAHAEPPPKNELAPEHYYTHIPGLSSSSAGCLGTAKWSFLMLIVLVLRV* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1220 538 MobiDBLite consensus disorder prediction 360 396 - -
Pvu1g1220 538 MobiDBLite consensus disorder prediction 310 457 - -
Pvu1g1220 538 MobiDBLite consensus disorder prediction 330 349 - -
Pvu1g1220 538 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 535 - -
Pvu1g1220 538 MobiDBLite consensus disorder prediction 416 433 - -
Pvu1g1220 538 MobiDBLite consensus disorder prediction 1 21 - -
Pvu1g1220 538 PANTHER F20B24.21 1 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1220 Pvu-Chr1 32907738 32912835 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1220 15 307 C3H Transcription Factor Family AT3G10810 52.203 1.11e-80 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1220 - - vun:114187175 886.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1220 1 32907738 32912835 Pvu1g1220 1 32907738 32912835 ECH