Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1195 TATATATCTCAAACAAAGAAGTTGGGAGCAGTTGGCCTACCAACTTATAGAAGTTTCTCATTGGAAGAGATTGAGGCAGCTACAAACTACTTTGACACAGTTTCTTTAATGGGTGAAGATTCCTATGGAAAGATGTACAGAGGTCAGCTGAAGAATGGTTCGGTCGTTGCTATTCGATGTGTAGAAATGAAAAAGAAATACAGCACTCAAAACTTTGTGAACCACATAGAGCTGATATCAAAACTCAGGCATCGTCACTTAGTCAGTGCTATTGGACACTGCTTTGAATGTTCTTTGGATGATTCGAGTGTCAACAAAGTGTTTCTTGTCTTTGAATACGTACCAAACGGCACGCTCAGGAATTGGATCTGTGATGAGAATGCAAGAAAATGCTTGAATTGGACCCAACGCATTGGAGCTGCAATTGGAGTGGCAAAGGGAATCCAGTTTTTGCACACAGGGATTGTCCCTGGTGTATATTCCAACGATCTCAAGATAGAAGATGTTTTATTGGATCAGAATCTTGTTGCGAAAATCAGCAGTTATCACCTGCCTTTGTTATCTAACATGGGGAAGGTTCGACATGGAAATTCTTCAAGTGGATTAAAACATTCTAGCAACAATAAAAGTGTCAAGCATGGAGATAAGTCTGATATATACGACCTTGGAGTGATACTACTCGAACTCATTCTAGGAAGGCAAATAAGGACAGCGAATGATGCAGACGCTTTTAGGGATCTGTTGCAAGCAAGCTTAGGAGCTGATGAAGAGGGTAGGAGGAATGTGGTTGATACAGCAATTCGTAAGGCATGCTTGGATCAATCATTGAAGACAATGATGGAGATATGTGTGAGGTGTCTGGTTAAAGAGGCAGAAGATAGGCCCTCCATAGAAGATGTTTTGTGGAACTTGCAGTTTGCATCTCAAGTGCAGGATGCATGGAGAGGGGATTCACAAAGTAGTGAAGGGTCACCAGGCTCAGAATCTGGAGGACTTCCCTTTCATTAG 1008 0.4177 YISQTKKLGAVGLPTYRSFSLEEIEAATNYFDTVSLMGEDSYGKMYRGQLKNGSVVAIRCVEMKKKYSTQNFVNHIELISKLRHRHLVSAIGHCFECSLDDSSVNKVFLVFEYVPNGTLRNWICDENARKCLNWTQRIGAAIGVAKGIQFLHTGIVPGVYSNDLKIEDVLLDQNLVAKISSYHLPLLSNMGKVRHGNSSSGLKHSSNNKSVKHGDKSDIYDLGVILLELILGRQIRTANDADAFRDLLQASLGADEEGRRNVVDTAIRKACLDQSLKTMMEICVRCLVKEAEDRPSIEDVLWNLQFASQVQDAWRGDSQSSEGSPGSESGGLPFH* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1195 335 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 1 329 - -
Pvu1g1195 335 PANTHER OS07G0166700 PROTEIN 1 329 IPR045272 GO:0004714|GO:0006468
Pvu1g1195 335 SUPERFAMILY Protein kinase-like (PK-like) 13 308 IPR011009 -
Pvu1g1195 335 MobiDBLite consensus disorder prediction 314 335 - -
Pvu1g1195 335 Pfam Protein tyrosine and serine/threonine kinase 36 301 IPR001245 GO:0004672|GO:0006468
Pvu1g1195 335 Gene3D Transferase(Phosphotransferase) domain 1 114 322 - -
Pvu1g1195 335 Gene3D Phosphorylase Kinase; domain 1 3 113 - -
Pvu1g1195 335 ProSiteProfiles Protein kinase domain profile. 31 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1195 Pvu-Chr1 32334013 32337089 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1195 1 333 Miscellaneous Gene Families AT3G03770 62.500 6.80e-148 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Pvu1g1195 PK_Tyr_Ser-Thr 1.7e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1195 - - pvu:PHAVU_001G1151000 661.759