Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1193 ATGATCACCAGCACCATCACTGTGGTACTTGTCAGCTCAGTGGTGTTTGGTTTGATGACTAAGCCACTCATAAGGCTTTTACTGCCTCATACTCCACATCCTAAAGAATTAAACATCATGATAGCCACAGATCCATCTACTCCAAAATCAGCCACTGTCCCACTTCTTGGGAGTGCCCAGGACTCAGAAGTCGATATTGATTCAATCCATCGTCCAAGCAGCATCCGCGCATTGCTTAGAACTCCAACACACACTGTTCATCGTGTGTGGCGTAAGTTTGATGATGCATTCATGCGTCCTGTTTTTGGTGGAAGGGGTTTTGTTCCTGTAGAACCTGGCTCTCCAACTGAACGTAATGGCCAACAATGGCGTTGA 375 0.464 MITSTITVVLVSSVVFGLMTKPLIRLLLPHTPHPKELNIMIATDPSTPKSATVPLLGSAQDSEVDIDSIHRPSSIRALLRTPTHTVHRVWRKFDDAFMRPVFGGRGFVPVEPGSPTERNGQQWR* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1193 124 PANTHER SODIUM/HYDROGEN EXCHANGER 1 123 IPR018422 GO:0006812|GO:0015299|GO:0016021
Pvu1g1193 124 PANTHER SODIUM/HYDROGEN EXCHANGER 2 1 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1193 Pvu-Chr1 32301724 32302213 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1193 1 119 Antiporters AT3G05030 56.911 1.51e-39 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1193 - - pvu:PHAVU_001G115000g 242.276