Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1171 ATGTTGGTAACCGTGAAAGCATGTTGCACTGTGAGGCCAATGGAGGCAACATGGTGCGGACGCGTAGCTTTATCTGAATGGGATCAAACAGGCAAAGTAACCCACGTCCCCATGATCTACTTCTATCGTCTTCCACAAAACTTCCTCTCTCAAGACAACATCATTGCTTCCACCTTGAAGGACTCATTAAGCCGAGTCCTGGTGCCGTTTTATCCACTTGCTGGTCGTTTACATTGGACAAACAATGGACGTTTAGAACTTGATTGCAACGCCACCGGCGTTCGATTCATTGAAGCTGAGTCCTCATCAACTTTAGAAGATCTCACTGATTTTTCAGCTTCTTCAAAATACCACCACCTTGTCCCTACTGTGGACTACTACTCCCTCCCAATTCACGAGTTGCCGTTGGCTCTGGTTCAGCTAACCAAATTCAAGTGTGGTGGCATTTGTATTGGCGTAACACTTTCGCACGTAGTTATAGATGGACCAAGTGCAATGCACTTCACATGTGAGTGGGCAAGGCTTGCACGGGGCCAGACTCTGCATACGGTGCCATTCCTTGACCGGAAAGTTTTGCGTGCTGGGGAGCCTCCTTTGGTGCCACTAACAAAATGTCACGTTCACACGGAGTTCGATGATCCTCCCTTGTTGCTGGGCCGAACTGATAACAATGAGGAAAAGAAGAAGGAAACCAGAATGGTTACCATTAAAATAAGCAGAAGTCAAGTTGAAACATTGAAAAAGAGAGCAAATGAGAGTTCGCATAGGCCTAGAAATGGTCGTGGTTATTCCCGTTATGAGAGTGTGACTAGTCACATATGGAGAAGTGCATGCAAGGCAAGGGATCACAAAGAGAACCAACCAACTATGCTTACTATTGCCGTTGACTCGAGAGGTCGCATGGAACCTCCTTTGCCAAAAGGGTACTTCGGGAATGCCAATTTGGATACTGTTGCATGTAGTCTTGCGGGTGATTTGGTGTCAGAGCCTTTGGGGTTTACGGCGAGTAGAATAAGGGAGGCGATCGAGAGGGTGAGCGATGAGTATGTGAGGTCGGGGATTGAGTTCTTGAAGAATCAGGAGGATTTGAGAAGGTTTCATCAAGATCTTCATCCAGAAGGGAGAGAGAAGGAGCCTTTCTATGGGAACCCCAATTTGTCTGTGGTTAGTTGGTTGAGGTTGCCTCTATATGACACTGATTTTGGGTGGGGGAAGGGGGTTTATACGAGTCCAGCAACACATGACTTTGATGGAGATTTCGTGCTTCTTCCCGATCCTGATGAGGATGGATCTGTGCTGGTTTGTTTAGGTCTGCAAGTGCTGCATATTGATGCATTTAGGAATCATTTTTACCAGGACATTGCATAA 1368 0.4656 MLVTVKACCTVRPMEATWCGRVALSEWDQTGKVTHVPMIYFYRLPQNFLSQDNIIASTLKDSLSRVLVPFYPLAGRLHWTNNGRLELDCNATGVRFIEAESSSTLEDLTDFSASSKYHHLVPTVDYYSLPIHELPLALVQLTKFKCGGICIGVTLSHVVIDGPSAMHFTCEWARLARGQTLHTVPFLDRKVLRAGEPPLVPLTKCHVHTEFDDPPLLLGRTDNNEEKKKETRMVTIKISRSQVETLKKRANESSHRPRNGRGYSRYESVTSHIWRSACKARDHKENQPTMLTIAVDSRGRMEPPLPKGYFGNANLDTVACSLAGDLVSEPLGFTASRIREAIERVSDEYVRSGIEFLKNQEDLRRFHQDLHPEGREKEPFYGNPNLSVVSWLRLPLYDTDFGWGKGVYTSPATHDFDGDFVLLPDPDEDGSVLVCLGLQVLHIDAFRNHFYQDIA* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1171 455 Gene3D - 1 212 IPR023213 -
Pvu1g1171 455 Pfam Transferase family 3 452 - -
Pvu1g1171 455 Gene3D - 219 453 IPR023213 -
Pvu1g1171 455 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 454 - -
Pvu1g1171 455 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 5 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1171 Pvu-Chr1 31600824 31602191 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1171 1 452 Monolignol Biosynthesis Gene Families AT5G48930 36.564 1.97e-103 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1171 K13065 - gmx:100777532 706.442