Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1168 ATGGTTACCATCCACAGTTCCGTTGTTGTGGTGCCCTCCGAGACTACACCAACTTCAAACTCCTCACTCTCCCTCTGCGACCAAATCAAGCTTCCAAACCACGGATCTCAGCTCTACATCTACGCCAACACAGGCATCACCCGTGATTCCTCCTTCGCTTCTGCGGTCCACACTCTCTCAACATCTCTCAGCAAAACCCTCACTGTCTTCCACCCTTTGGCCGGTCGCTTGCGACGGATCCACGGTGGCCGCTTAGAGCTTCTCTGCAACGCCAAAGGGGCACTACTCGTAACAGCCACATGCAACACTCAACTCAGTTTTGAAGATCTGTGTGAGTTCGCTCCCACCTACGCTGTCCCAAAGATCAACTACGATGTCCCCATTGAGGATGTTCCATTGCTGGGGGTGCAGATCACCAGGTTCCCCTGTGGTTTCATCACACTTGGAATTGCCATGTGTCGCGCTTTCCTCGACGGAAATTCACTTTCGAGCTTCGTTAAATCGTGGGCCAAACTCGCTAGAGGGGAGAATTTAGATTCTGATTTGATTCCTTTTCTTGATCGATCGAAACTAGATTCGTTCAAACTGAATAAACCACCGCGATTTGAACATCCCGAGTTTCTGCCACCGCCCCTTTGGAAAACACGTGATGAGGAGATGCAACATGAACTTGATACGGCCATGTTGGTAGTGACAAAAGGGCAAGTTCAGAAACTGAAGAATAAAGCCAGTGACTTTGGAAGTGGGTATGGTAAGGTTCCCCTACGAGGTTATACTAGCTTTGAGGTCATAAGTGGTCACTTGTGGAGGTGTATGTGCAAGGTGCGTTATTCAGGTGATGTGTGTCAACCAACAAGATTGAACACTTTGGTTAATTGTAGAAGCCGTTTGAGGCCATCTCTCCCCACTGCTTATTTTGGCAATGCAACATTTCCTACTGTGACAGAAACTTGTTCCTTTGATGACATTATGCAGAAACCTCTTGGCTATGCTGTGAGGAAAGTGAGAGAAGCGATTGAGAAAATGCATGAGGAGTATGTTAAGTCTGCTCTTGATTATATAGCACGTGTGGAGGACATGGATTTGTTGAGGGACACGTTTTACAAGTCTGCTAGGAAAGACATGGAAGACCCCAATTTGAATGTGGTTGTTTGGACCAATTTTTCGTATTTTGAGACCGATTATGGCTGGGGGAAACCGGTTTGTTTGCTTCCCGGGAACATTAATTCTAATGGTAAGGCTTTCCTTTTGGACACTGCAAGTGGTGATGGCTTCGTTCTAGCTGTTTGTTTGCGGAGATCATATATAGATGTGTTGAAGAAGTTGTTCTATGAGGATATAGAGAAGCATGCTTCTAAATTGTGA 1365 0.4637 MVTIHSSVVVVPSETTPTSNSSLSLCDQIKLPNHGSQLYIYANTGITRDSSFASAVHTLSTSLSKTLTVFHPLAGRLRRIHGGRLELLCNAKGALLVTATCNTQLSFEDLCEFAPTYAVPKINYDVPIEDVPLLGVQITRFPCGFITLGIAMCRAFLDGNSLSSFVKSWAKLARGENLDSDLIPFLDRSKLDSFKLNKPPRFEHPEFLPPPLWKTRDEEMQHELDTAMLVVTKGQVQKLKNKASDFGSGYGKVPLRGYTSFEVISGHLWRCMCKVRYSGDVCQPTRLNTLVNCRSRLRPSLPTAYFGNATFPTVTETCSFDDIMQKPLGYAVRKVREAIEKMHEEYVKSALDYIARVEDMDLLRDTFYKSARKDMEDPNLNVVVWTNFSYFETDYGWGKPVCLLPGNINSNGKAFLLDTASGDGFVLAVCLRRSYIDVLKKLFYEDIEKHASKL* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1168 454 Pfam Transferase family 1 444 - -
Pvu1g1168 454 Gene3D - 1 209 IPR023213 -
Pvu1g1168 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 449 - -
Pvu1g1168 454 Gene3D - 213 446 IPR023213 -
Pvu1g1168 454 PANTHER SHIKIMATE O-HYDROXYCINNAMOYLTRANSFERASE-RELATED 4 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1168 Pvu-Chr1 31334786 31336631 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1168 2 445 Monolignol Biosynthesis Gene Families AT5G48930 32.675 2.07e-72 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1168 K13065 - gmx:100819383 634.024