Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1167 ATGGTGAGCATTCAATCTCGATACACTGTGTTTCCCTCAGAAAGCACCCCGAACGAAAAACTCTATTCTTTGTGCGAGCAAATCAAGCTTCGCACTCATGCGCCACTCCTTTACGTGTTCAAGCCACACCCTCATCACGATGCATCAAATTTTGTAAACACTCTGAGGCACTCTCTTAGCCAAGCCTTGACAATCTATTACCCAATTGCGGGTAGGTTGAGTTGGATCCAAGGGGGGCGATGGGAGCTCCATTGCAATGCCAAGGGTGCACAAGTCTTGGAAGCCATTTGCAAAGATGTGAATTTGGATGATTTGGGTGATTTTGTGCCTACCCATTTGGTGTCACAGCTCATACCAAGCATCGATTATGATGTTCCCATTGAGGACACGCCCTTGTTGGTTGTGCAGCTTACGAGGTTCCCTTGTGGTGGCGTTACCATTGGGGTGGCTTTGTGTAGAGGGACCATCGACGGAATCGCCACCATGCGGTTCATGAACACGTGGGCCAAGTTGGCTCGGAGGGAGAACGTGGAAAGGACACCATGCCATGATCGAAATGTTTTGAGCTCGTACAAGACTCATTCGGTGTTGCACGATCATTCGGAGTTTCACCCTCCTCCTCCTTGGTTAGGTCCCTTGGGGAAAGACACCAAGGTGGTGGTTGCAATAGTGAAGCTCACGCGTGAACAAGTGAAGAAGCTCAAGCACAAGGGGAATCACGATAGCACGAACACTACTAGTCCTAGTCCTGGTCCTGGTTCACAACCTTATTCAACTTTTGAGGTTATTTCAGGGCACTTGTGGAGGTGTGTGAGTAAAGCACGTTATTCAGGGAAAAGGGAGCAACCTACAAGGTTGAGCACTTTGGTTAATTGTAGGGGCCGAATGAGGCCACCTCTTCCTGAAAATTATACAGGGAATACAGCATTTCCCACAGTGACACCAACATGCTCTTTTGGTGAAATCATGCATAGGCCTTTGAGTTATGCTGTTGGGAACGTTAGGGTGGCACTTGAAAGAATGACGGGGGAGTTTGTGGAGTCTGCACTTGACCACATAGCAAGGGAGAAAGACATGAATATGGTTAGGTACAATTTTCATTACCCTGCCCCAACTGTGCATAAGGGCCCATACAAGGGGAACCCGAATCTTTTTGTTGTGAGTTGGATGAATTTCTCGTTCAAGGATGCGGATTTTGGATGGGGAGAACCCTTGTATTTTGGCCCCGGGTACATGGATTCTGAAGGAAAAGCATTTCTTATGAATGAGGCTAAGGGCGGTGGCATCATTGTGGCCATTTCCTTGGAAGCATCTCACATGGATGCTTTCAAGAAATATTTCTATGGTGATATCGAGGAGGAATCTCTCATTTCCAAGCTGTGA 1383 0.4758 MVSIQSRYTVFPSESTPNEKLYSLCEQIKLRTHAPLLYVFKPHPHHDASNFVNTLRHSLSQALTIYYPIAGRLSWIQGGRWELHCNAKGAQVLEAICKDVNLDDLGDFVPTHLVSQLIPSIDYDVPIEDTPLLVVQLTRFPCGGVTIGVALCRGTIDGIATMRFMNTWAKLARRENVERTPCHDRNVLSSYKTHSVLHDHSEFHPPPPWLGPLGKDTKVVVAIVKLTREQVKKLKHKGNHDSTNTTSPSPGPGSQPYSTFEVISGHLWRCVSKARYSGKREQPTRLSTLVNCRGRMRPPLPENYTGNTAFPTVTPTCSFGEIMHRPLSYAVGNVRVALERMTGEFVESALDHIAREKDMNMVRYNFHYPAPTVHKGPYKGNPNLFVVSWMNFSFKDADFGWGEPLYFGPGYMDSEGKAFLMNEAKGGGIIVAISLEASHMDAFKKYFYGDIEEESLISKL* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1167 460 Gene3D - 211 449 IPR023213 -
Pvu1g1167 460 MobiDBLite consensus disorder prediction 232 256 - -
Pvu1g1167 460 MobiDBLite consensus disorder prediction 241 256 - -
Pvu1g1167 460 Pfam Transferase family 1 448 - -
Pvu1g1167 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 456 - -
Pvu1g1167 460 Gene3D - 1 205 IPR023213 -
Pvu1g1167 460 PANTHER SHIKIMATE O-HYDROXYCINNAMOYLTRANSFERASE-RELATED 3 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1167 Pvu-Chr1 31167336 31169061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1167 2 448 Monolignol Biosynthesis Gene Families AT5G48930 35.604 4.01e-86 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1167 K13065 - gmx:100775549 732.25