Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1166 ATGAATTCCTCCAACTTCGAAACCACTGATTCCATCATCATAAACTCCAACAACACGCTCATGGTCTGTTTCAATAAGGCTACTTATAACGGTTCTGCCCTTTGGCTGGAAAATTCTTTGGAGAAAACACTTCCTTCATTTGTCCTGCAATTCGCCATCATCCTAGCTCTCAACCGCCTTTTGTTCGTTGTAGCAGAACAATACCATGTACCTCGTATTGTTGCCAATATTTTTGCTGGTTTTCTGTTAGGTCCATCTGTTATGGGACGTTGGAATGTTTTTATGGAACAGTTATTTCCTTTTAGCAACATGATACCATTAGAGACGATGGGATCATTAGCTCTTGTTTACTACGTGTTTTTGGTGGGCCTAGAGATAGACTTGAAGCCAATAAGGACGTTGAACAAAAAGACAAAACTTATAGCCATTGCAGGCACCGTATTCCCCATACCAATAGGGTTTGGCTTGTACTACATGCTTGCCACCGACATGGGGCGAAAACCTTTGTCCAGTGACAACGTTAGACCAAAGGGTGCAATATTATGGGGACTCACCCTTTCTTGCAGCAGTGAGTTCCCTGAGATTGCAAAGATCCTTTCAGATCTGAAGCTTCTGCTCACGGAGAATGGACAGCTGGCTCTCACAGCTTCTCTCCTTAACGACTTGGTTTCATGGACCCTTTTTGTGTTGACCCTGACACAATTCTACCACGCTTCTGTCATAACGTTTCTCATTACTGTGGTAATTCTGTTGTGTTTTCTGGCACTTCACCCCCTTTTCGAGTGGCTATTCAACAATGTGGGAATGGCTGATAAAGAGTTCCTGGAGTCACAAGTCATATTTGTGCTGCATGTCGTTTTGGTTATTGGGTTGTTAACTGATGGATTGGGCGTGCTTTCGATAACCGGGGCTTTCTTTTTGGGTGTTGTGATGCCTCAGGGGGCGCTTAACAATGCGGTGCAGGACAAGGTGCAGGATTTTGTGGGTGTGTTCATGATGCCTTTGTTCTTTGTGATCGTTGGAGAGAGGATTATGATCCAAGACTTGGGCTTGCAGACACATTGGACAACTGTGGTGGTGGTGGTTGTGTTGGCCTTGGTGACGAAGATTGTGTGCACTATGGCTGTCACTTGGTTCTACCAGATGCCGCACATGGAAGGATTATCCCTTGCAGTGCTCATGAATACTAAAGGAATAATGCCATTGATCATTCTCTGCACCGGTAGGGACAGACTTGAACTGGACAACCAAAGCTTTGGGGTGATGTTGTTGGCGTGCTGGTTAATGACAATCCCCATGGGATCTGTGCCATCAGCTTTAACAAAGGCATTGAAAAGCAGAATGATTATGGGAGGGCAACGCAAGACGAATGACACACAACCAGACTCACCCCTCAGACTACTAGCCTGCATCCACACAAAGCATGATGCCGACGTGATTATAGAGCTCTTAAAAGCCTCGGGTCCCTCTGTGAGAACCCCAATCCAAGTTCTAGCAGTGGAACTCAACAAAATAACCAATCGCCCCGCATCATCACTCATCATAAAGAACGCTCGAAAACCATCCTTCACCTCAAAGTCCTCCAAGCTAGGCTCCCAAGACACCCTCGGAAGCTTCGACAGTCTCAGCCAAGCCATCTTCGCAGACCAAATGAGTATCATCTCAGACTACAACACCATGCACAAGGACATCCTCAACCTCGCAAGACGCAGAGGTGTCACACTTATCTTATCCACATTCCACAAGCAACCAACCTACGATGGTTTAGGAGCAGGTGCTGCAACTGCAAGAGCTGTCAACATCATCAACCGCGACCATGCAAGCAAAGACGAGAAGAAAGTGGTGTTGGAGAATCTAGTTAAGGATGCACCGTGTTGTACGGCCATATTAGTGGACAGAGGGGTGAGTCACAAGCGTTCCAAGGAGCTACGTGTGGCTATGTTCTACATTGGTGGTGGTGATGACCGTGAAGCTCTTTCTTATGCATGGAGGATGACTAGGAGTGCTGAGGTGAATCTAACGTTGGTGAGGCTTGTTTGGGAGAACCCTAATGATGAGTTTGATGAAACTGATAAGGAGTTCATCGAGGGGTTTAAGCAACAGATGGGGGAGTCGGCAAAGGTGAGGTATTTGGAGAAGGTGGTGAGGGATGAGAAGGAAACAGTGAGGGTTTTGAACAAGATAGGGAACAAAGGGTTTCATTTGTTTATATTAGGAAGAGGGCATGGGAGGAAGATGTCATTGGCACAAACAGTGGATCCTGTGTTGGATGAGCCTGTGTTAGGGCCTCTTGGGGATGCTTTGACGGATCTGAACTCTGCAGCTGAGACCTCTATTTTGATATTCCAAAGACAGGTTGAACATGTGGAAGGGAAGCATGTGAGGTCTGCATCATCTCCTGACGATAAAGTGTTTGATTGCATGATGGAGCAAAAGTTAATGTGCCCTTCAACCAGGTCTACAGTGATTTTAACTCAGGTTGCTTGA 2487 0.4616 MNSSNFETTDSIIINSNNTLMVCFNKATYNGSALWLENSLEKTLPSFVLQFAIILALNRLLFVVAEQYHVPRIVANIFAGFLLGPSVMGRWNVFMEQLFPFSNMIPLETMGSLALVYYVFLVGLEIDLKPIRTLNKKTKLIAIAGTVFPIPIGFGLYYMLATDMGRKPLSSDNVRPKGAILWGLTLSCSSEFPEIAKILSDLKLLLTENGQLALTASLLNDLVSWTLFVLTLTQFYHASVITFLITVVILLCFLALHPLFEWLFNNVGMADKEFLESQVIFVLHVVLVIGLLTDGLGVLSITGAFFLGVVMPQGALNNAVQDKVQDFVGVFMMPLFFVIVGERIMIQDLGLQTHWTTVVVVVVLALVTKIVCTMAVTWFYQMPHMEGLSLAVLMNTKGIMPLIILCTGRDRLELDNQSFGVMLLACWLMTIPMGSVPSALTKALKSRMIMGGQRKTNDTQPDSPLRLLACIHTKHDADVIIELLKASGPSVRTPIQVLAVELNKITNRPASSLIIKNARKPSFTSKSSKLGSQDTLGSFDSLSQAIFADQMSIISDYNTMHKDILNLARRRGVTLILSTFHKQPTYDGLGAGAATARAVNIINRDHASKDEKKVVLENLVKDAPCCTAILVDRGVSHKRSKELRVAMFYIGGGDDREALSYAWRMTRSAEVNLTLVRLVWENPNDEFDETDKEFIEGFKQQMGESAKVRYLEKVVRDEKETVRVLNKIGNKGFHLFILGRGHGRKMSLAQTVDPVLDEPVLGPLGDALTDLNSAAETSILIFQRQVEHVEGKHVRSASSPDDKVFDCMMEQKLMCPSTRSTVILTQVA* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1166 828 Pfam Sodium/hydrogen exchanger family 54 431 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Pvu1g1166 828 Gene3D - 45 447 IPR038770 -
Pvu1g1166 828 PANTHER CATION/H+ EXCHANGER 3 18 792 - -
Pvu1g1166 828 PANTHER CATION/H + ANTIPORTER 18 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1166 Pvu-Chr1 31056485 31059815 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1166 16 786 Antiporter Super Family AT2G13620 32.515 2.76e-130 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1166 - - gmx:100780176 1213.75