Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1130 ATGGGACGACTCAGGCTTTTGCTTGCAGATTTCGTTCTGTCTTTCATGTGGGTATGCTCCGGTGTCCTCGTTCGCCTCATCGTCTTCCAACATCTTGGCTTCGACCACTCACCCCTTGGTGAGGTTATCAAAACCTCCTTCTCCGTCGCCAACATGTTCTTCTTCTCCTTTCTCGTCAAGGTTACACGTGGCGCCTACAACCCCCTCACCGTTTTGGCTGATGCTATCTCTGGGAATTTTAACAACTTCCTCTACTGCGTTGGTGCTAGAATCCCCGCACAGGTGATTGCATCGATTGTTGGCGTTAAATTTCTTATCGAAACCATTCCTGAAGTAGGACAGGGACCACGTTTGAATGTTGACATTCATCAGGGTGCACTCACAGAAGGATTATTAACATTTGCAATTGTAAGCATTTCACTTGGACTTACCACAAAAATTCGCGAAAATTTCTTCATGAAGACTTGGATTTCCAGCCTCTCCAAATTAACACTTCATATTCTTGGTTCTGATCTGACTGGTGGCTGCATGAACCCTGCATCTGTAATGGGATGGGCTTATGCACGAGGGGATCACATAACAAAGGAGCACTTCTTTGTATACTGGCTTGCTCCCATAGAGGCAACTATTTTAGCAGTGTGGACAAGCAAATTGCTGGTGCAGCCTGCAAAAGAAGATAACACAGCCTCAAAGAGTAAATCGGATTGA 708 0.4562 MGRLRLLLADFVLSFMWVCSGVLVRLIVFQHLGFDHSPLGEVIKTSFSVANMFFFSFLVKVTRGAYNPLTVLADAISGNFNNFLYCVGARIPAQVIASIVGVKFLIETIPEVGQGPRLNVDIHQGALTEGLLTFAIVSISLGLTTKIRENFFMKTWISSLSKLTLHILGSDLTGGCMNPASVMGWAYARGDHITKEHFFVYWLAPIEATILAVWTSKLLVQPAKEDNTASKSKSD* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1130 235 SUPERFAMILY Aquaporin-like 4 229 IPR023271 -
Pvu1g1130 235 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu1g1130 235 PRINTS Major intrinsic protein family signature 86 105 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu1g1130 235 PRINTS Major intrinsic protein family signature 128 146 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu1g1130 235 PRINTS Major intrinsic protein family signature 159 181 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu1g1130 235 PRINTS Major intrinsic protein family signature 199 219 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu1g1130 235 PANTHER AQUAPORIN SIP2-1-RELATED 1 235 - -
Pvu1g1130 235 Gene3D Glycerol uptake facilitator protein. 2 235 IPR023271 -
Pvu1g1130 235 Pfam Major intrinsic protein 4 214 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu1g1130 235 PANTHER AQUAPORIN SIP2-1-RELATED 1 235 IPR044226 GO:0015267
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1130 1 235 Major Intrinsic Protein MIP AT3G56950 58.650 3.09e-101 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1130 K09875 - gmx:100786138 409.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1130 1 29347076 29349648 Pvu1g1130 1 29347076 29349648 ECH
Pvu1g1130 1 29347076 29349648 Pvu4g0833 4 13200080 13205512 PCT