Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1114 ATGGATTTCCTGCAAGCACCAGAAAATCAGATACTTCTGGGTGTGGCCGTGGCCGTCGTGGCCGCTGGGCTTGGTGCTGTCTTTCTCTTTTCATCTAAGAAGCGTAAAGGTTGCTTGGACCCAGAGAACTTCAAGGAGTTCAAACTTGTTAAGCGTGCACAGCTGAGCCATAATGTTGCAAAGTTCACATTTGCCCTCCCAACACCTACATCTGTTTTGGGTCTTCCAATTGGGCAACACATAAGTTGCAGGGGTAAAGATGCACAAGGTGAAGACGTTATCAAACCATATACCCCTACTACTTTGGATTCTGATGTTGGACATTTTGAACTAGTTATTAAGATGTACCCACAAGGAAGGATGTCTCACCATTTCCGTGAGTTGCGTGTTGGTGACTCCCTTGCTGTGAAAGGACCCAAGGGACGTTTCAAGTACCAAACTGGTGAGGTTAGAGCATTTGGGATGCTTGCTGGAGGGTCTGGAATCACCCCAATGTTCCAAGTTGCTAGAGCTATATTAGAAAACCCTAAGGACAAGACCAAAGTACATCTTATCTACGCCAATGTAACATATGAGGATATTCTTTTGAAGGAAGAACTTGATGGTCTTGCTTCTAACTATCAAGATCAATTCAAAATATACTACGTGTTAAATCAGCCTCCGGAGGTGTGGGATGGTGGTGTTGGATTTGTGTCTAAGGAGATGATTCAAGCCCATTTGCCTGCTCCAGCACATGACGTAAAGATCCTGAGATGTGGCCCACCACCTATGAACAAGGCCATGGCTGCACACCTTGAAGCCCTTGAATATGCTCCTGAGATGCAGTTCCAGTTCTGA 837 0.4552 MDFLQAPENQILLGVAVAVVAAGLGAVFLFSSKKRKGCLDPENFKEFKLVKRAQLSHNVAKFTFALPTPTSVLGLPIGQHISCRGKDAQGEDVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFRELRVGDSLAVKGPKGRFKYQTGEVRAFGMLAGGSGITPMFQVARAILENPKDKTKVHLIYANVTYEDILLKEELDGLASNYQDQFKIYYVLNQPPEVWDGGVGFVSKEMIQAHLPAPAHDVKILRCGPPPMNKAMAAHLEALEYAPEMQFQF* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1114 278 CDD cyt_b5_reduct_like 47 278 - -
Pvu1g1114 278 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 278 IPR001834 GO:0016491
Pvu1g1114 278 SUPERFAMILY Riboflavin synthase domain-like 38 146 IPR017938 -
Pvu1g1114 278 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 134 274 IPR039261 -
Pvu1g1114 278 PRINTS Cytochrome B5 reductase signature 73 84 - -
Pvu1g1114 278 PRINTS Cytochrome B5 reductase signature 95 102 - -
Pvu1g1114 278 PRINTS Cytochrome B5 reductase signature 131 145 - -
Pvu1g1114 278 PRINTS Cytochrome B5 reductase signature 154 173 - -
Pvu1g1114 278 PRINTS Cytochrome B5 reductase signature 192 203 - -
Pvu1g1114 278 PRINTS Cytochrome B5 reductase signature 248 256 - -
Pvu1g1114 278 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 42 146 IPR017927 GO:0016491
Pvu1g1114 278 Gene3D Translation factors 37 135 - -
Pvu1g1114 278 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 154 173 IPR001709 GO:0016491
Pvu1g1114 278 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 192 203 IPR001709 GO:0016491
Pvu1g1114 278 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 248 256 IPR001709 GO:0016491
Pvu1g1114 278 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 278 - -
Pvu1g1114 278 Pfam Oxidoreductase FAD-binding domain 47 145 IPR008333 -
Pvu1g1114 278 Pfam Oxidoreductase NAD-binding domain 155 261 IPR001433 GO:0016491
Pvu1g1114 278 Gene3D - 136 278 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1114 Pvu-Chr1 27797073 27804862 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1114 2 278 NADPH P450 reductases AT5G17770 84.892 1.15e-169 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1114 K00326 - gmx:100816447 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1114 1 27797073 27804862 Pvu1g1114 1 27797073 27804862 ECH