Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1107 ATGAAGTACTTCACCACCATTCTTATCTTGTTCTTTGTCTTTCCCTTTGCTTTTGGTGACCTGAGAGTTGGGTTCTATGGGTCTAGCTGCCCCAGAGCAGAGGAAATTGTTAGACAAGTTGTTCAAAGGAGATTCAACCGTGATCGATCCATTACTGCAGCCTTGCTTCGCATGCACTTCCATGATTGCTTTGTCAGAGGGTGTGACGCGTCCATATTAATAGACTCAAGCAAGGGCAACCAATCTGAGAAAGCCGCAGGAGCAAACGGCACCGTTCGGGGGTTCGAGCTAATAGACGAAATAAAAAAAGCGTTGGAAACAGCGTGCCCTTCAACGGTTTCATGCGCGGATATAATAACCCTGGCCACACGTGATTCCGTGGCCATGGCAGGTGGGCCCCGATACGACGTCCCAACGGGAAGACGTGACAGCGTCGTGTCGAGAGCTTCTGACGTGGCGCTGCCAGGGCCACGTTCCTCTGTGTCGGTGGTGCAGCAAACCTTCGCCGCAAACGGCATGTCATTGGATGAAATGGTCACGCTCTTGGGAGCGCACACCGTCGGTTTGGCGCACTGTAGTTTCTTTCGCGACAGGCTCAAGGACCCCAACATGGACCCTGGTTTGCAGGCCAAGTTGGGCCGGATTTGCAGGCCCAAAAATGGAGATCCAACAACTTTTCTGGACCAAAACACGTCGATGGTTTTTGACAATGAATTCTACAATCAAATTGTTTTGAAGAAGGGTGTGCTTTTTATTGATCAACAATTGGCTTTGGACCCTTTGTCGAGTAGCTTGGTGTCAGCTTTTGCTGGGAACAGTGCGGCTTTTCAAAGGAGTTTCATTGATGCTATTGTGAAGATGGGGAAAATTAGGGTTTTGGTGGGAACTGATGGACAGATTAGGAAAAATTGTAGGGTTTTTAACTGA 927 0.4898 MKYFTTILILFFVFPFAFGDLRVGFYGSSCPRAEEIVRQVVQRRFNRDRSITAALLRMHFHDCFVRGCDASILIDSSKGNQSEKAAGANGTVRGFELIDEIKKALETACPSTVSCADIITLATRDSVAMAGGPRYDVPTGRRDSVVSRASDVALPGPRSSVSVVQQTFAANGMSLDEMVTLLGAHTVGLAHCSFFRDRLKDPNMDPGLQAKLGRICRPKNGDPTTFLDQNTSMVFDNEFYNQIVLKKGVLFIDQQLALDPLSSSLVSAFAGNSAAFQRSFIDAIVKMGKIRVLVGTDGQIRKNCRVFN* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1107 308 PANTHER PEROXIDASE 25-RELATED 11 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu1g1107 308 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu1g1107 308 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu1g1107 308 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu1g1107 308 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu1g1107 308 PRINTS Haem peroxidase superfamily signature 228 243 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu1g1107 308 Pfam Peroxidase 37 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu1g1107 308 CDD secretory_peroxidase 21 307 IPR033905 GO:0004601|GO:0042744
Pvu1g1107 308 SUPERFAMILY Heme-dependent peroxidases 20 308 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pvu1g1107 308 ProSitePatterns Peroxidases proximal heme-ligand signature. 177 187 IPR019793 -
Pvu1g1107 308 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu1g1107 308 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu1g1107 308 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu1g1107 308 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu1g1107 308 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu1g1107 308 PRINTS Plant peroxidase signature 176 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu1g1107 308 PRINTS Plant peroxidase signature 226 241 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu1g1107 308 PRINTS Plant peroxidase signature 242 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu1g1107 308 PRINTS Plant peroxidase signature 282 295 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu1g1107 308 ProSiteProfiles Plant heme peroxidase family profile. 20 308 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu1g1107 308 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601
Pvu1g1107 308 Gene3D - 25 308 - -
Pvu1g1107 308 Gene3D Peroxidase, domain 2 155 287 - -
Pvu1g1107 308 PANTHER PEROXIDASE 44-RELATED 11 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1107 Pvu-Chr1 27305060 27307105 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1107 1 308 Peroxidase AT4G26010 58.065 2.98e-127 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1107 K00430 - gmx:100820340 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1107 1 27305060 27307105 Pvu4g0580 4 6914346 6916118 PCT