Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1106 ATGAAGATCATTGTTATATTGCCCTTCTTTTGCATCATACTTCCCTTAGTATTTGGGGACTTGAAGGTTGGATTCTATGAGTCTTCATGCCCAGAAGCGGAGTCCATTGTGAAGAAAGCTGTGCAGAATCGATTCAATCGTGACAAGACCATTACTGCAGCGTTGCTTCGCTTGCATTTCCATGACTGTGCTGTCAGAGGTTGCGATGCATCCATACTTATAAACTCCACAACGTCTAACACAGCAGAGAAAGATTCAGGAACAAACGACGACGTTCGGGGCTTTGACCTAATCGATAAAGTGAAGGAAAGCCTGGAATCTGCATGCCCTTCAACAGTGTCATGTGCAGACATCATAACCCTAGCTACCCGAAGTGCAGTGGCCTTATCTGGAGGACCCAAATACGAAGTTCCCACGGGAAGACGCGATGGATTGGTCTCAGACGTCAGAGAAGTGAACATTCCAGGACCCACCAGCCCCGTCTCAATAATCTCTGAATTTTTCAATAGGAATTTGGGCCTCACAACGCAGGAAATGGTGACCCTTTTTGGTGCACACACAGTTGGGGTTGCACACTGCAGTTTCTTTGCTGATAGACTCTCGACTCCTGACCCTACAATGGACCCTGCGTTGAATACTAAGTTGGTGAAGTTGTGCAGCTCCAGAGATGATGATCCTTCTACTCCCTTAGACCAGAACACTTCTCTGCTTGTTGATAACAAGTTCTACCAGCAGATTCTTGCGAAGAAAGGGGTGCTGCAGATTGATCAGCAACTTGCCTTGGATAAAGGTACCAAAGGGTTTGTCACAGATTTCGCTTCTAATGGGGCTAAGTTCCAAAAGAGCTTTGCAAATGCGATGGTAAAGATGGGGAGTGTTGATGTTCTGGTTGGGAGTCAAGGAGAAATCCGCAAGAAATGCTCCGTTTTCAATACCCGCAACTAG 945 0.4635 MKIIVILPFFCIILPLVFGDLKVGFYESSCPEAESIVKKAVQNRFNRDKTITAALLRLHFHDCAVRGCDASILINSTTSNTAEKDSGTNDDVRGFDLIDKVKESLESACPSTVSCADIITLATRSAVALSGGPKYEVPTGRRDGLVSDVREVNIPGPTSPVSIISEFFNRNLGLTTQEMVTLFGAHTVGVAHCSFFADRLSTPDPTMDPALNTKLVKLCSSRDDDPSTPLDQNTSLLVDNKFYQQILAKKGVLQIDQQLALDKGTKGFVTDFASNGAKFQKSFANAMVKMGSVDVLVGSQGEIRKKCSVFNTRN* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1106 314 Gene3D - 24 311 - -
Pvu1g1106 314 Pfam Peroxidase 37 275 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu1g1106 314 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601
Pvu1g1106 314 PANTHER PEROXIDASE 11 310 - -
Pvu1g1106 314 PANTHER PEROXIDASE 25-RELATED 11 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu1g1106 314 CDD secretory_peroxidase 21 310 IPR033905 GO:0004601|GO:0042744
Pvu1g1106 314 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu1g1106 314 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu1g1106 314 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu1g1106 314 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu1g1106 314 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu1g1106 314 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu1g1106 314 PRINTS Plant peroxidase signature 229 244 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu1g1106 314 PRINTS Plant peroxidase signature 245 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu1g1106 314 PRINTS Plant peroxidase signature 285 298 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu1g1106 314 SUPERFAMILY Heme-dependent peroxidases 20 311 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pvu1g1106 314 Gene3D Peroxidase, domain 2 155 290 - -
Pvu1g1106 314 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu1g1106 314 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu1g1106 314 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu1g1106 314 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu1g1106 314 PRINTS Haem peroxidase superfamily signature 231 246 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu1g1106 314 ProSiteProfiles Plant heme peroxidase family profile. 20 311 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1106 Pvu-Chr1 27248630 27250774 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1106 1 311 Peroxidase AT4G26010 54.633 2.25e-119 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1106 K00430 - gmx:100777946 478.789