Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1096 ATGGGGTTCAGAGTCAGTTTCACTTTGTTCCTGAATATCTCCTTCCTCATGATCGTGTTTTGTGTTTCTCTTATTGCCCATCTCCACTCTTCGGATCATGTTGTTCTGAGGAGAAACCGGTTAGAATTGAGGGGGGATGAAAAAGATTGCAAAAGTTTCCACAAATTGAGGGACTCAAAAGCCAAGTGCATGTATTTGAAATCCAATGATCCGTGTGTTTCTCAGGGTTATGTTGACTACTTGTACCTTTTCTATTGCAAACTGGGGGGTTTCCCTCTATTGGGTCACAGTCTTTTGTTTCTTTGGCTTTTGGTTCTGTTCTACCTGTTGGCTAACACTGCCTCTGACTACTTTTGTCCTTCTCTTGAGAACTTGTCCAAATTGCTGAGGCTCTCTCCCACAATTGCAGGGGTGACTCTTCTCTCTCTTGGAAATGGTGCTAGTGATGTTTTTGCCACCCTTGTCTCTTTCAACGGTAGTGGGACCCAGGACATTGGTTTCAACACTGTGCTTGGAGGTGCATCCTTTGTTTCCTGTGTTGTGGTTGGAATAGTGAGCATTTCAATGAGGCAAAGGCGGATTCGGGTCAAGAAGTGGGCCTTGGTGAGAGATGTTTGTTTCCTGCTCTTGGTTCTTCTCTGTTTGTTGATCATTTTGATCACTGGTGAGGTCAGTGTTCCTGGGGCAATCAGTTTTTGCTTGATGTATGTGGTGTATGTGGTGGTTGTTTATGTCTCATCTAATCGAGGGAATAAAGGTGTGTGTGGCGATGCTGATACTGAAAGTGATGGTGATTTGAGTCACGGTGGCGGCAATGATTTAGGTGTCCCTTTGCTTAGTGGGATGGAGAAAGGACTTGCAGATACAGCTCAGGAATTTGACGTGAAAATTGGGAGGAAATGTTGCTGTTTAAAATCTTCAAGTTGTAGAATGTTAATTTCTGTCATGGAGATACCACTTTACTTGCCTAGGAGATTGACAATTCCTGTTGTTTGTGAAGAGAGATGGTCCAAAGGGTATGCAGTTTGTTCAGCTATGCTAGCACCACTTCTATTGTCCTTCTTGTGGGTACCAAACAAGGAAAACAACTTCAACTCAAGTCTTATTGTTTATGGAATTGGATTGTTTGTAGGGATTACACTAGGGGTAACAACATTTTTCACAACCAATGTGTCAAGTCCTCCAAGGAAGTACTTGTTTCCTTGGCTTGCAGGAGGATTTGTGATGAGTGTTAGTTGGAGCTACATTTCAGCTCAAGAATTGGTGGGGTTGTTGGTTTCACTTGGTTACATATGTGGAGTTAGTCCTTCAATTCTGGGGCTAACAGTTCTTGCCTGGGGGAATTCACTTGGGGATTTGGTGACAAATATGACATTGGCTTTGAATGGTGGGTCAGAAGGTGCTCAGATTGCAATATCAGGGTGTTATGCTGGCCCTATCTTCAATATAGTGGTTGGATTGGGCTTATCTCTGGTGAGCACTACTTGGTCCGAGTACCCATCTTCTGTTGTGATTCCTAGAGATCCATATCTTTGGGAGACATTGGCACTTTTGGCAGTTGGATTGGTTTGGGCTCTTGCTGTGTTGATTAGAAGAGATATGAAGCTTGATGCAGTATTGGGAGTAGGGCTCTTGGTTATTTACTTCATTTCTCTCTTTCTGAGGCTGATTCAGACTTTTGGGTCTTTCCAATTTCAGAATATGATAAACTCACTCTTCATAAGATGA 1728 0.43 MGFRVSFTLFLNISFLMIVFCVSLIAHLHSSDHVVLRRNRLELRGDEKDCKSFHKLRDSKAKCMYLKSNDPCVSQGYVDYLYLFYCKLGGFPLLGHSLLFLWLLVLFYLLANTASDYFCPSLENLSKLLRLSPTIAGVTLLSLGNGASDVFATLVSFNGSGTQDIGFNTVLGGASFVSCVVVGIVSISMRQRRIRVKKWALVRDVCFLLLVLLCLLIILITGEVSVPGAISFCLMYVVYVVVVYVSSNRGNKGVCGDADTESDGDLSHGGGNDLGVPLLSGMEKGLADTAQEFDVKIGRKCCCLKSSSCRMLISVMEIPLYLPRRLTIPVVCEERWSKGYAVCSAMLAPLLLSFLWVPNKENNFNSSLIVYGIGLFVGITLGVTTFFTTNVSSPPRKYLFPWLAGGFVMSVSWSYISAQELVGLLVSLGYICGVSPSILGLTVLAWGNSLGDLVTNMTLALNGGSEGAQIAISGCYAGPIFNIVVGLGLSLVSTTWSEYPSSVVIPRDPYLWETLALLAVGLVWALAVLIRRDMKLDAVLGVGLLVIYFISLFLRLIQTFGSFQFQNMINSLFIR* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1096 575 Pfam Sodium/calcium exchanger protein 403 555 IPR004837 GO:0016021|GO:0055085
Pvu1g1096 575 Pfam Sodium/calcium exchanger protein 100 244 IPR004837 GO:0016021|GO:0055085
Pvu1g1096 575 PANTHER CATION CALCIUM EXCHANGER 4 564 - -
Pvu1g1096 575 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 4 564 - -
Pvu1g1096 575 Gene3D - 343 556 IPR044880 -
Pvu1g1096 575 Gene3D - 131 256 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1096 Pvu-Chr1 26715496 26717223 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1096 1 562 Antiporters AT5G17850 51.832 8.69e-171 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1096 K13754 - gmx:100787016 865.914