Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1011 ATGGGAACCTCTTGCATAGAATCTCCATCACTTGTTCAAGATCTGAAGGTGACCATCCACGAAACTTCAACGATTTTCCCATCCAAAGAAACGGAGAAGAAGACCTTGTTCCTATCAAACATCGACAAGGTAGTGAACTTTGACGTGGACACGGTTCACTTCTTCTCAGCAAACAAAGATTTTTCACCCCAAAAGGTGGCTCAGAAGTTGAAGAAGGCCCTAGAGGATGCTCTTGTGTGCTATGACTTCTTAGCCGGAAGATTGAGTCTGAACCCCGAAACAAAACGATTAGAGATAGATTGCAACGCAAAGGGTGCTGTGTTTGTGGTGGCTTCCACTCACCACATGTTAACTGAGATTGGAGATCTCGCTTATCCCAATCCAGCTTTTGCACATTTGGTTCACAAGACTGAGGATTTCCTTAAACCAACCGATCTTCCACTATGCACACTACAGGTAAAATGCTTCCATTTTTGCAAATCTGCGTTTGGTAACTCCAATTTATTGCATCTGGTTGTTCAATATGTTGCATCAGCTGCACTTTATCTTGCCTGGGCTGCCCAAAATGCAACATCATTTGAATAA 585 0.4308 MGTSCIESPSLVQDLKVTIHETSTIFPSKETEKKTLFLSNIDKVVNFDVDTVHFFSANKDFSPQKVAQKLKKALEDALVCYDFLAGRLSLNPETKRLEIDCNAKGAVFVVASTHHMLTEIGDLAYPNPAFAHLVHKTEDFLKPTDLPLCTLQVKCFHFCKSAFGNSNLLHLVVQYVASAALYLAWAAQNATSFE* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1011 194 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 13 166 - -
Pvu1g1011 194 Gene3D - 11 192 IPR023213 -
Pvu1g1011 194 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 166 - -
Pvu1g1011 194 Pfam Transferase family 15 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1011 Pvu-Chr1 21530459 21531043 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1011 15 164 Monolignol Biosynthesis Gene Families AT5G48930 33.117 3.40e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1011 K13065 K15400 pvu:PHAVU_001G097500g 387.111