Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1010 CTGACATCCTTCGAGTGTGGTGGCTTTGCAATGGGCTTCTCAACCAGCCACATGGCCTTTGACGGACTTAGCTTCAAAACCTTCTTGGACAACCTTGCCGCACTGGCTGCTAATAAGCCCTTCGCAGTCATACCCTGCAACGACAGGCACCTCTTGGCCGCACGATCCCCGCCACGTGTCACCTTCCCGCACCCCGAGTTAATCCAGCTCGATTACCTACCCACAGGTATTGAGTCCACCGTCTTTGATGCTTCCAATGAAGAACTCGACTTTAGGGTTTTGAAACTAACCTCAGAAGACATCCTGAGCCTGAAGGAGAAAGCAAAGGGAAGCACCAATGCCCGTGCCACTGGCTTTAACGTTATCACCGCCCATGTATGGAGGTGCAAGGCCCTATCAGCACCCTATGACCCTAATAGATCATCCACCATACTCTTCGCCGTGGACATACGTTCGAAACTGATCCCTCCGTTGCCGAAAGGCTTCGCTGGTAACGCGGTGCTAACGGCGTATGCGGCGGCGACGTGCGAGGAGTTGGAGAAGGGCGAGTTCTCAAGGTTGGTGGAGATGGTGAAGGAGGGGGCAGAGAGAATGAGTGATGAGTATGCGAGGTCTATTATAGACCGTGGAGAGGTGCATGATGGGTTTCCACGTGGGGATGTTTTGGTGTCTACGTGGTGGAGATTAGGGTTTGAAGAGGTGGAGTATCCGTGGGGGAAGCCAAAGTATTGTTGCCCTGTGGTGCATCATCGGAAGGATATTATTCTGTTGTTTCCTCCCTTTGGTGGTGGTGGTGATGATGGGATAAACATTATAGTGGCTCTTCCTCCCAAGGAAATGCAAAAATTCGAGACCCTCTTTTACATGTTCTTGAATTCAGTCTGA 885 0.5153 LTSFECGGFAMGFSTSHMAFDGLSFKTFLDNLAALAANKPFAVIPCNDRHLLAARSPPRVTFPHPELIQLDYLPTGIESTVFDASNEELDFRVLKLTSEDILSLKEKAKGSTNARATGFNVITAHVWRCKALSAPYDPNRSSTILFAVDIRSKLIPPLPKGFAGNAVLTAYAAATCEELEKGEFSRLVEMVKEGAERMSDEYARSIIDRGEVHDGFPRGDVLVSTWWRLGFEEVEYPWGKPKYCCPVVHHRKDIILLFPPFGGGGDDGINIIVALPPKEMQKFETLFYMFLNSV* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1010 294 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 2 289 - -
Pvu1g1010 294 Pfam Transferase family 2 287 - -
Pvu1g1010 294 Gene3D - 1 68 IPR023213 -
Pvu1g1010 294 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 2 289 - -
Pvu1g1010 294 Gene3D - 77 289 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1010 Pvu-Chr1 21522400 21523284 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1010 1 288 Monolignol Biosynthesis Gene Families AT5G48930 27.632 2.82e-30 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1010 K13065 K15400 gmx:100805510 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1010 1 21522400 21523284 Pvu4g0672 4 8407549 8412075 PCT