Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g1006 ATGGTTGGTGCCATAAAAGCTGCGATTGGAGACGCGGTGTTGACTTTCATGTGGGTGTTTTGTTCCTCTGTGTTGGGGATTGCTTCTGGGTACGTAACCAAAGCCCTTAACCTTCAAGACATCTCCTACAATGGGTTCCCTTACCCTTCTTTCATTGTCACCATTACCCTCGTCTTTCTACTTGTTTTCCTTTTCACCATCATCGGCAATGCCCTCGGTGGAGCTAGCTTCAACCCCACCGGCACCGCTTCCTTTTACGCCGTTGGTCTCGGTTCTGATACGCTCTTCTCAATGGCGATTCGTTTTCCTGCTCAGGCAGTTGGTGCTGCGGGTGGTGCATTGGCAATTATGGAAGTGATTCCTGAAAAGTATAGGCATATGATTGGGGGTCCTTCTTTGAAAGTGGATTTGCACACTGGGGCTGTTGTTGAAGGGGTGTTGACCTTTTTTATTACCTTTATCGTTCTCTTCATCTTCCTCAAGGGCCCTCGTAGTGATTTGTTGAAGACTTGGTTTCTGGCCACAGCAACTGTAGTTTTGGTCATGGTTGGATCTGCCTACACCGGCCCAGCCATGAATCCTGCCAATGCTTTTGGTTGGGCATACTTAAACAATTGGCACAACACATGGGACCAATTGTATGTATACTGGATTTGCCCCTTTGCCGGAGCAATATTGGCTGCATGGCTGTTCCGTGCAATCTTCCCCCCACCATCACCACCAGAAGTCAAACAAAAGAAAGCATGA 747 0.4806 MVGAIKAAIGDAVLTFMWVFCSSVLGIASGYVTKALNLQDISYNGFPYPSFIVTITLVFLLVFLFTIIGNALGGASFNPTGTASFYAVGLGSDTLFSMAIRFPAQAVGAAGGALAIMEVIPEKYRHMIGGPSLKVDLHTGAVVEGVLTFFITFIVLFIFLKGPRSDLLKTWFLATATVVLVMVGSAYTGPAMNPANAFGWAYLNNWHNTWDQLYVYWICPFAGAILAAWLFRAIFPPPSPPEVKQKKA* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g1006 248 Gene3D Glycerol uptake facilitator protein. 3 244 IPR023271 -
Pvu1g1006 248 Pfam Major intrinsic protein 4 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu1g1006 248 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu1g1006 248 PRINTS Major intrinsic protein family signature 58 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu1g1006 248 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu1g1006 248 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu1g1006 248 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu1g1006 248 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu1g1006 248 PANTHER AQUAPORIN SIP1-1 3 247 - -
Pvu1g1006 248 SUPERFAMILY Aquaporin-like 4 244 IPR023271 -
Pvu1g1006 248 PANTHER AQUAPORIN SIP1-1 3 247 IPR044222 GO:0015250
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g1006 Pvu-Chr1 21371290 21375239 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g1006 1 235 Major Intrinsic Protein MIP AT3G04090 58.723 7.37e-81 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g1006 K09875 - gmx:100792787 457.603