Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0971 ATGGCTGAGCTTCAAATGATAAGTGCTGTTGCTTCTTTCTCTAACTCTTCCTCCATGGTGTCTTCTAAAAAATATGATGTTTTTCTAAGCTTTCGAGGTGAGGACACTCGCATGAACTTCACAAGCCATCTTCATGAGCTTGAGAAGGGAGATAGAATCTCACCAGCACTCACCAAAGCAATTGAAGATTCTCGTGTATCGATTGTGATACTCTCAGAGAACTATGCTTCCTCAAAGTGGTGCTTAGAAGAACTCAGCAAGATTCTGGAATGCCACAAAAACCATGGACAAATTGTGATTCCAGTGTTTTACAACATAGACCCCTCCCATGTTAGGAAGCAAACAGGGTGCTATGAGCTAACCTTTGCAACACACCATGGAGAACTCAGGTGCAACAAATGGAGAGCTGCTCTCACTGAAGTAGCCAATTTAGCTGGGTGGGATTCTCGAAACAGGATTGAATCTGAATTCCTTAAGGAGGTTGTTAAAGATGTTCTACGAAAACTGACTCCTAGATACCCAAACCAACTTAAAGGACTAGTTGGAATCGAGAAAAGTCTTAAACAGATTGAATCGTTATTAAAAATTGGTTCAAGTGAAGTTAGAACCGTTGGAATATGGGGCATGGGCGGAATAGAGAATAAAGATCATGGGATTGAAAATTTTGACATGAGGAGGCTTCAACGTATAAACGTGTTCGTTGTTCTTGATGATGTGGGTACCTCAGAGCAGTTAGAAAAGCTAATTCTAGAATACGACTTCCTAGGACCAGGAAGTAAAGTCATTGTTACAACTAGAAATAAGCAAATACTTAGTCTAGTTGATGAAATATATGAGGTTGAAGAATTGAGCTCATATCACTCTCTTCAACTTTTCTGTTTGACTATATCTGGAGAAAAGCAACCTAAAGATGGATATGAAGATTTATCAAAAAGAGCAATTTTGTATTGCAAAGGTATTCCTCTGGCTCTAAAAGTTTTGGGTGCAACTTTACGTAAAAAAAGTAAAGTGGTATGGGAATGTGAATTGAGAAAACTCCAAAAGCTTCCAAATATTGAAATTCATAATGTGCTAAAATTAAGTTATGACTGCTTAGATCGCTCTCAAAAGGACATATTTTTAGACATTGTATGCTTCTTCAAAGGATGGGAGAGAGATAGGGTAACAAATATTCTGGAGGCTTGTGATTTCTTTGCAGCATCTGGGATAGAATCCCTTTTAGATAAAAGTCTCATAACAATTTCAAATTATAATCACATAAAAATGCATGACTTGATACAAGAAATGGGCTGGGAAATTGTTCATCAGGAGTCTATCAAAGACCTTGGAAGGCGAAGTGGATTATGGAAACATGAGGAAGTGCGTGATGTTTTAAAATATAACAAGGGGACTGATTTTGTTGAAGGCATAATTTTAGATTTGGAGAAATTAGGTGGAGATTTGTATTTGAGTTGTGATTCCCTTGCAAAGATGACTAACATGAGATTTCTTAGAATCCATAGACGAAAATGGGGCTGCAGATTTAGTGTGCACCTTCCTGATGGTATTGAATCTTTGCCTAATAAACTGAGGTACCTTGAGTGGGAAGGATTCTGTCTTAAGTCTTTGCCATCAAACTTTTGTGCTGAACAACTTGTAGAGCTTCACATGTGGAATAGCAAGCTTAAAAAGCTTTGGGATGGTATTCAGAACCTTGTGAATTTAAAGACAATTTTCCTTGATGACTCTCGAGACTTGATTGAGATCCCAGACTTATCTATGGCGGAAAATCTTGAAAAAGTGTCCCTTTATGATTGTGAAAGCTTATGTCAGCTTCATCCATCCATCTTATCTCTTCCCATACTTAAATATTTAATTTTAAGTGGTTGCAAAGCCATTCAGAGCATAAATCTTCATTCAAAATCTCTTAATGTACTGAGACTCAGAGGTTGTTCATCTCTCAATGAATTTTCTGTGACATCAGAGGAGATGACACATTTGGACTTGTCTCAAACCGCTATACGTGAATTGTTGTCACCAATGATCTCTCTCCCCAAGCTTACATATTTGTACTTAAGTGGCTGTAGACATATTGTAAACATCAATGTTCATTTAAAATCTCTCCGTGTACTAACACTTGTTGGTTGTTCAAATCTCAAAGAATTCTCAGTGGCATCAGAGAAGTTGACACTATTGGAGTTACCTGACACTGCTATATGTGTATTGCCATCATCAATTGGTCACTTGTTGTCTTTAGAAGAGTTAGACCTACGTGGAACTAATATTGAGTGCTTGCCTGCAAGTATCAAAAGCCTTTCAATGTTAAGAGTGCTTTGGTTAAATGATTGCAAGAAACTGGTATCTCTACTAGAGCTTCCACCATCCTTAAGAGAACTTTATATAAATGATTGTTGGAAACTTGTGTCTCTGCCGGAGCTTCCACCATCAGTGAAAGAGGTGAGTGCCTTTAACTGTCTTTCTCTAGAGGAAAGCATCACACAAGAGCTAGTGTTACGACACATCTTACAAAATTGCATACCCTCCAAACATCAACAATATCTTTACAATCCTGTGTACATTGATGGTGGTTATTTCATCTTTCCCTGTGACCACGTCACCTATAATTGTGGGTTTCATGCACCAGAGAGTTCAATAACTATTCCTTCTCTTCCTAAATCTCACTTGTGGGGTTACATTTTTGGCATCATTATTGCTAAGGGACCAATGTCAGATCATCAGTTTTCTTGTTCTATCTATCGAGAAGATATATTGGTAGGTGGTGTTCATCGAAGGTTTATAGGCTGCGAAAGTTTAATTTCAGATCATTTGTTATTTTTGTACCATGATGTTAGCAATTTTGGTGGAACAAATGAAGTGGATGGTCCTTTTAATAGCATTACATTTGTGTTTGAATTTAATGGTGATAATGACACCATAAAAGGGTGTGGGGTCTTTCCGGTATATGGGACATCATCTGGGTTTAAGTTGGTGAGTAGTAGTAGCAAGGAAATCTTCTATGATGTTGAGTCACAACCAAGAGCAAATGGAGCTAAAATTGGAGGTTGTGATAAACAAAATTGGGAACAACTTTCAGTAACCAAGAGAAGAAAGACTGTACCTGATACTCTCTTCCTGTGA 3117 0.3779 MAELQMISAVASFSNSSSMVSSKKYDVFLSFRGEDTRMNFTSHLHELEKGDRISPALTKAIEDSRVSIVILSENYASSKWCLEELSKILECHKNHGQIVIPVFYNIDPSHVRKQTGCYELTFATHHGELRCNKWRAALTEVANLAGWDSRNRIESEFLKEVVKDVLRKLTPRYPNQLKGLVGIEKSLKQIESLLKIGSSEVRTVGIWGMGGIENKDHGIENFDMRRLQRINVFVVLDDVGTSEQLEKLILEYDFLGPGSKVIVTTRNKQILSLVDEIYEVEELSSYHSLQLFCLTISGEKQPKDGYEDLSKRAILYCKGIPLALKVLGATLRKKSKVVWECELRKLQKLPNIEIHNVLKLSYDCLDRSQKDIFLDIVCFFKGWERDRVTNILEACDFFAASGIESLLDKSLITISNYNHIKMHDLIQEMGWEIVHQESIKDLGRRSGLWKHEEVRDVLKYNKGTDFVEGIILDLEKLGGDLYLSCDSLAKMTNMRFLRIHRRKWGCRFSVHLPDGIESLPNKLRYLEWEGFCLKSLPSNFCAEQLVELHMWNSKLKKLWDGIQNLVNLKTIFLDDSRDLIEIPDLSMAENLEKVSLYDCESLCQLHPSILSLPILKYLILSGCKAIQSINLHSKSLNVLRLRGCSSLNEFSVTSEEMTHLDLSQTAIRELLSPMISLPKLTYLYLSGCRHIVNINVHLKSLRVLTLVGCSNLKEFSVASEKLTLLELPDTAICVLPSSIGHLLSLEELDLRGTNIECLPASIKSLSMLRVLWLNDCKKLVSLLELPPSLRELYINDCWKLVSLPELPPSVKEVSAFNCLSLEESITQELVLRHILQNCIPSKHQQYLYNPVYIDGGYFIFPCDHVTYNCGFHAPESSITIPSLPKSHLWGYIFGIIIAKGPMSDHQFSCSIYREDILVGGVHRRFIGCESLISDHLLFLYHDVSNFGGTNEVDGPFNSITFVFEFNGDNDTIKGCGVFPVYGTSSGFKLVSSSSKEIFYDVESQPRANGAKIGGCDKQNWEQLSVTKRRKTVPDTLFL* 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0971 1038 SUPERFAMILY "Winged helix" DNA-binding domain 353 459 IPR036390 -
Pvu1g0971 1038 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 147 IPR035897 -
Pvu1g0971 1038 ProSiteProfiles TIR domain profile. 5 169 IPR000157 GO:0007165
Pvu1g0971 1038 SUPERFAMILY L domain-like 481 822 - -
Pvu1g0971 1038 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 212 IPR044974 GO:0006952
Pvu1g0971 1038 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 674 752 IPR044974 GO:0006952
Pvu1g0971 1038 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 221 675 IPR044974 GO:0006952
Pvu1g0971 1038 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 755 971 IPR044974 GO:0006952
Pvu1g0971 1038 Gene3D - 21 174 IPR035897 -
Pvu1g0971 1038 Pfam Leucine Rich Repeat 544 563 IPR011713 -
Pvu1g0971 1038 Gene3D - 213 281 IPR027417 -
Pvu1g0971 1038 Gene3D Ribonuclease Inhibitor 655 839 IPR032675 -
Pvu1g0971 1038 Gene3D Ribonuclease Inhibitor 470 654 IPR032675 -
Pvu1g0971 1038 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 674 752 - -
Pvu1g0971 1038 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 221 675 - -
Pvu1g0971 1038 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 17 212 - -
Pvu1g0971 1038 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 755 971 - -
Pvu1g0971 1038 PRINTS Disease resistance protein signature 203 218 - -
Pvu1g0971 1038 PRINTS Disease resistance protein signature 264 278 - -
Pvu1g0971 1038 PRINTS Disease resistance protein signature 467 481 - -
Pvu1g0971 1038 PRINTS Disease resistance protein signature 696 712 - -
Pvu1g0971 1038 Pfam NB-ARC domain 226 347 IPR002182 GO:0043531
Pvu1g0971 1038 Gene3D - 282 366 IPR042197 -
Pvu1g0971 1038 SMART till_3 24 144 IPR000157 GO:0007165
Pvu1g0971 1038 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 376 IPR027417 -
Pvu1g0971 1038 Pfam TIR domain 24 181 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0971 Pvu-Chr1 19977753 19981637 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0971 21 748 WRKY Transcription Factor Family AT4G12020 33.209 4.67e-96 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0971 - - gmx:100813283 1425.22