Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0960 ATGGGGGTCTTACAGGAGAAGCTGTCCTTGTTCTACAAGAGCCGATGGCTGGTGTTCGTGGCCGCAATGTGGTTGCAGTCGTGGGCGGGTATCGGCTACCTCTTTGGGAGCATATCACCGGTCATCAAGAGCTCCCTCGGCTACAACCAGAAGCAGCTCGCCATGTTGGGTGTGGCCAAGGACCTCGGCGACGCCGTCGGCTTCATGACAGGGTTGCTCTGTGAGTTGTTACCCATCTGGGGTGCTCTCCTTGTCGGTGCTGCTTTGAACCTCATCGGCTATGGCTGGGTCTGGTTGGTTGTAACAGCTCAAGTTCCGGTTTTGCCTTTGTGGGCTATGTGTGTTCTTATCTTTGTGGGAACAAATGGTGAAACCTACTTTAACACAGTTTCTCTGGTGTCTTGTGTACAAAATTTCCCCAAAAGCCGGGGTCCTGTGGTGGGAATTCTAAAGGGCTTTGCTGGGTTGAGTGGTGCAATCTTATCACAGATATATGCATTGTTTCATGCCCCTAATCAGGCATCATTAATATTTATGGTTGCTGTTGGTCCAGCATTAGTAGGTATAGGCCTTATGTTCCTTGTGAGGCCTGTTGGGGGTCACAAACAAGTCCGGCCATCGGATGGAAAATGCTTCACATTTGTGTATGGTGTGTGCCTCCTATTGGCTGCTTATTTGTTGGGAGTCATGGTTGTCCAAGATCTAGTTGAAGTGAGTGAAACTGCAATCTCTATATTCACAGTTATTCTCTTGTTGATCCTTGTTATCCCAATTGTTATTCCCATTATATTGAGTTTTGGCCCTGAGCAAAGAAATCCAGAAGAAGAGTCCCTTCTTCCAGAACCACAGAATAAAGATCCAGGGAAATCTCAGTCGGATTCTGAGGAAGTAATATTGAGTGAGTTGGAAGATGAGAAGCCTAAGGAAGTGGACATGCTCCCTGCATCAGAGAGGCAGAAACGTATAGCGCACCTACAACAAAGACTGCTCCAAGCAGCTGCAGTAGGAGCAGTGAGGGTTAAGAGGAGGAGGGGACCACACAGAGGGGAAGATTTCACCTTGATGCAAGCATTGATCAAAGCAGACTTTTGGCTTCTTTTCATTTCCATGATCATGGGTTCTGGATCCGGGTTGACTGTAATTGACAATCTGGGTCAGATCAGCCAATCTCTAGGATATGACAATGCACATATATTTGTCTCCATGGTCAGTATTTGGAACTTCCTTGGCCGTGTTGGAGGAGGTTACATATCTGAGCTTGTTGTGAGAGATCATGCGTATCCAAGACCAATTGCATTGGCTGTATTTCAACTCATTATGACTATCGGGCATTTTTTCATTGGTATGGGATGGCCAGGGGCAATGTATGTTGGCACTTTACTGGTTGGACTTGGTTACGGGGCTCATTGGGCAATTGTTCCAGCCACTGCCTCTGAGTTGTTTGGTCTGAGAAACTTTGGTGCACTGTACAATTTCATTACTCTGGCAAACCCCGCAGGAACACTGGTCTTCTCTAGTCTCATTGCCAGCACCATCTATGATTCTGAAGCAGAGAAACAACATCCCCAAAGTATGGGATCATGGCTGTTGCATTTGCCAAATGCTTCTGAGTCTCTGAAATGTGAAGGTAGCGTATGCTTTTTCCTAACTTCCATGATCATGTCAGCATTATGCGTTCTTGCAGCAGGCCTATGCATGGTTCTAGTGTTAAGAACAAGGATTGTCTATGCCAACCTATATGGAAAAACTTCTTCTAGTAGACTTCGATTATGA 1773 0.4636 MGVLQEKLSLFYKSRWLVFVAAMWLQSWAGIGYLFGSISPVIKSSLGYNQKQLAMLGVAKDLGDAVGFMTGLLCELLPIWGALLVGAALNLIGYGWVWLVVTAQVPVLPLWAMCVLIFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILSQIYALFHAPNQASLIFMVAVGPALVGIGLMFLVRPVGGHKQVRPSDGKCFTFVYGVCLLLAAYLLGVMVVQDLVEVSETAISIFTVILLLILVIPIVIPIILSFGPEQRNPEEESLLPEPQNKDPGKSQSDSEEVILSELEDEKPKEVDMLPASERQKRIAHLQQRLLQAAAVGAVRVKRRRGPHRGEDFTLMQALIKADFWLLFISMIMGSGSGLTVIDNLGQISQSLGYDNAHIFVSMVSIWNFLGRVGGGYISELVVRDHAYPRPIALAVFQLIMTIGHFFIGMGWPGAMYVGTLLVGLGYGAHWAIVPATASELFGLRNFGALYNFITLANPAGTLVFSSLIASTIYDSEAEKQHPQSMGSWLLHLPNASESLKCEGSVCFFLTSMIMSALCVLAAGLCMVLVLRTRIVYANLYGKTSSSRLRL* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0960 590 SUPERFAMILY MFS general substrate transporter 11 197 IPR036259 -
Pvu1g0960 590 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 3 583 - -
Pvu1g0960 590 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 583 - -
Pvu1g0960 590 MobiDBLite consensus disorder prediction 274 292 - -
Pvu1g0960 590 Pfam Nodulin-like 15 262 IPR010658 -
Pvu1g0960 590 SUPERFAMILY MFS general substrate transporter 212 572 IPR036259 -
Pvu1g0960 590 MobiDBLite consensus disorder prediction 273 296 - -
Pvu1g0960 590 CDD MFS_Mch1p_like 14 562 - -
Pvu1g0960 590 Gene3D MFS general substrate transporter like domains 360 575 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0960 Pvu-Chr1 19377677 19381767 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0960 5 585 Nodulin-like Gene Family AT5G14120 69.692 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0960 - - gmx:100796700 1045.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0960 1 19377677 19381767 Pvu1g0960 1 19377677 19381767 ECH