Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0933 ATGGAGAATAATGACCTCGCAAAGAATTCTGGCGCTCACAACGCCGGTGACACGATGCCTCCTCGCGATGCTAAACATGACGGTGCCGCCGCCCAAGCGGAAACGTCGTCCCAAACGCCGCATGGTCAGGCGGAGGAGGAACAGAAGAAAGAAGAAACCGCCACGTCTACTCCGCAAAGCCTCGAGCAAGTTGCTCAAGAGATTGACCAATTCGTGAGGAGTCTAAAAAACGTTGGAAATGCGCAGAACTTTGCGATTCCTGACTTCAGTGAAAGGTACTTGGATCTGGTTGAAGAGAAGATAATGAAATACGACGCAGGTGAAGGTAAACCGAAATGGGGCGAGGTTTCGGAGGAAGATTCGTGGTTGGTGAACAACGCGAATCGGTTTTCAAAACTGATGACATTGGTGATTGATAATTATCCTGATCATGAACCAGAGAAGATCAGCGGTGCACAAGTCTCGATGATGAACCGCATTACCTCAATTCACCAGCGTTTGATGACGTATTTGGAGGAGGACTTCCGGTTTCTGATGGAAGAATCAAGAATCCCAACCGAATTGGATCCCGGAGGAAATAATCAGAACAGCATCGATACCAAAAGAAAACAACACATGGCAGCGTCGGAACAACAAGAGTTGGTGCATGAACAAGAAGGTAGTGAACAGGATACGAATTTCCCGGGGTACTCGGAGGAGACGATTGCAAGCCTAAGTAAGATCGCCAGAGAGATGTTATTCGGCGGCTACGAATCGGAGTGCTGCCAGGTGTATATCATTTCGCGGAGGAACGCCTTCGAGGAGATTAACCAGAAGCTAGGGTTAGAGAGGATCAGCATCGACGAGATGGTGACGAAGGTGCCGTGGGATACTCTGGCCAGGGACATGATCCCCGCCTGGATCAACACGCTCAAACAGTACGCGGCAGTGTACTTCCCCGGCGAGCGGAAGCTGACCGAGGCCGTGTTCGCAGAGAACCACGCGGTGGCGGCTGGACTCTTAGGCGGCCTCTCCCGCGGCGTGGTGATTCAGCTTCTCAACTTCGCGGAGGGTGCCGCCATGACGAAGCGAGCCGGAGAGAAGCTATTCAAGCTCCTGGACATGTACGAGAGCCTCTGCGAGGTGATACCCATCGCGGACAGACTCTTTCCAGAAGAGTCCGTCGAGGAGATGGAGACAGAGATGACCGTTGCCAAGTCCAGACTTGGCGAGGCATCTATCTACATTTTCTGCGAACTGGAGAACCAGATTAAATCGGAGACCGCGAAAACTGCCGTACCCGGTGGCGCAGTTCACCCCCTCACACGCTACATCATGAACTATCTCAACATAGCAGGGGACTACAAGGAAACCCTAGAGCAGGTTTTCATGGAGCATTGGAAGAGGAACCGTGCGGATTCAACAAGCAAGCCTGCAGAGCAGAAAAAGGAGGGGGGTTGGGACAAGGAAACACCATCTCCATTCGCAACACAGGTGTTGAGGGTGATGGACTTGCTAGACTCCAGCCTGGAGGGGAAGGCGCGTCTGTACAAAGAGGTGGCGCTGAGCAACTTCTTTATGATGAACAATGGGAGGTACATTCTGCAGAAGATAAAGGGTTCTAGCGAGATGAGCAAGGTGATGGGCGACAATTGGATCAGGAAGAAGTCATCAGAGCTGAGAAACTACCACAAGAACTACCAGAGGGAGACGTGGAACAGGGTGCTGCAGTGTCTGAACCACGAAGGGTTGAGCGTGAATGGGAAGGTGCACAAGCCGGTGCTGAAGGAGAGATTCAAGAGCTTCAACACGTTGTTCGATGAGATTCACAAGACGCAGACCTCGTGGGTGGTGAAAGACGAGCAGCTTCAGTCGGAGCTTAGGGTTTCCATCTCTGCAGTGATTATCCCGGCTTACCGATCATTCATTGGGAGGTTCGCCCAGACTTTTGATCCAGGGAGACAGACAGAGAAGTATATAAAGTACCAAGCTGAAGACATTGAGACTTACATTGATGAGTTGTTTGATGGGAAGCCTCACCAATCCATTGGAAGAAGAAGAACATAA 2046 0.5127 MENNDLAKNSGAHNAGDTMPPRDAKHDGAAAQAETSSQTPHGQAEEEQKKEETATSTPQSLEQVAQEIDQFVRSLKNVGNAQNFAIPDFSERYLDLVEEKIMKYDAGEGKPKWGEVSEEDSWLVNNANRFSKLMTLVIDNYPDHEPEKISGAQVSMMNRITSIHQRLMTYLEEDFRFLMEESRIPTELDPGGNNQNSIDTKRKQHMAASEQQELVHEQEGSEQDTNFPGYSEETIASLSKIAREMLFGGYESECCQVYIISRRNAFEEINQKLGLERISIDEMVTKVPWDTLARDMIPAWINTLKQYAAVYFPGERKLTEAVFAENHAVAAGLLGGLSRGVVIQLLNFAEGAAMTKRAGEKLFKLLDMYESLCEVIPIADRLFPEESVEEMETEMTVAKSRLGEASIYIFCELENQIKSETAKTAVPGGAVHPLTRYIMNYLNIAGDYKETLEQVFMEHWKRNRADSTSKPAEQKKEGGWDKETPSPFATQVLRVMDLLDSSLEGKARLYKEVALSNFFMMNNGRYILQKIKGSSEMSKVMGDNWIRKKSSELRNYHKNYQRETWNRVLQCLNHEGLSVNGKVHKPVLKERFKSFNTLFDEIHKTQTSWVVKDEQLQSELRVSISAVIIPAYRSFIGRFAQTFDPGRQTEKYIKYQAEDIETYIDELFDGKPHQSIGRRRT* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0933 681 MobiDBLite consensus disorder prediction 463 482 - -
Pvu1g0933 681 MobiDBLite consensus disorder prediction 463 483 - -
Pvu1g0933 681 Pfam Exo70 exocyst complex subunit 299 666 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pvu1g0933 681 PANTHER EXOCYST COMPLEX PROTEIN EXO70 48 676 IPR004140 GO:0000145|GO:0006887
Pvu1g0933 681 MobiDBLite consensus disorder prediction 188 202 - -
Pvu1g0933 681 MobiDBLite consensus disorder prediction 203 220 - -
Pvu1g0933 681 SUPERFAMILY Cullin repeat-like 121 669 IPR016159 -
Pvu1g0933 681 Gene3D Exocyst complex component Exo70 124 678 - -
Pvu1g0933 681 MobiDBLite consensus disorder prediction 186 229 - -
Pvu1g0933 681 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 48 676 - -
Pvu1g0933 681 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0933 Pvu-Chr1 16747319 16749973 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0933 15 681 EXO70 exocyst subunit family AT5G13990 46.915 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0933 K07195 - gmx:100820172 942.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0933 1 16747319 16749973 Pvu4g0761 4 10687565 10689691 PCT