Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0931 ATGATCAATTCACTTTGTGGAACCCTCAAGAGTGAGAGCAATTCTAAAACCAAACTCCAAGCCACATCTTCAAATGACTCATTTTTGCAATCCAAGAAAAATGCCACTCAATCCTCTGGTGATATTGACCAAACTACCCTAACCCCACCAAGCTTAAACCTTCCTGGACTCAAATTTGAGTTGGATGGAGATGTGGAAGTTCAGTCACCAGATAGTTCAATGTGGGAATCCTTTTTTGCTGACCAATTAGATGGTGATTTCATGATATCTTCTCCAGTGAGGAACGTCCCCTCCCCTCAAGTCTCTTCCTACAATTGCAACTATAACTATGCTCATGGAATGCAAAGCCAGAGTCTCTCAGGGTGTTCCCCACCAAGGTTTTCATCATCCCAGATTGGAGCCTTCAACAGCACCCACAAAGGGAAAGGACTTAGCCCTCTCCACAGGGTCTTCAACTCCCCAAACAATCAGTACATGCAGCATGTTGAAAACCTTTCCCTTCCAGCAATAGAAGAGTTCTTGGAGGACTATCAAGGGTATTCATCAACCAAGGTGTCTTCTGAAATTGCAACTTCATCTGAATGCTTTGACTTGTCTACTCAAATACCATCATCCTTATTGGATACCTTGACACTGCCCAATTCCTCAAGGTACCATGGTTCAGTCGATGAAGAATCCTCAGTGCACGCTGCTGGCTCTTCTCAACTCTCCCAAGAGAGCGACATCTATCACCAGATGGGGTCCATGGCTAGTGCATCCCTCTCACAGGCTCTACAACAAGAACGCTACCAAGAGAAACGGCAAAAGCGGCAAGCACAACAACTGCAACAACAACAACAGCGCCAGCAAGACAATATGATGGTGCCTATTCCAATCGGAATGGAGCAGGAGCAGGACAGCGGGCTTCAACTGGTGCACCTGCTTCTGGCCTGTGCAGAGGCAGTGGGGAAAGAGGAATACATGCTAGCAAGAAGGTACCTCCACCACCTCAACCGTGTCGTCACTCCCTTAGGCGACTCCATGCAGCGGGTGGCCGCGTGCTTCACCGATTCGCTCAGCGCCAGGCTCAATGCCACCCTCACTCCGAAACCCTCCAAACCCCTCAGCCCCTCAAACTCCATGGAAGTCCTCAAAATCTACCAGATCGTGTACCAGGCCTGCCCCTACGTCAAGTTCGCCCACTTCACCGCCAACCAAGCCATCTTCGAAGCCTTCGAAACCGAAGAGCGTGTCCACGTCATCGACCTCGACATCCTCCAGGGCTACCAATGGCCCGCCTTCATGCAGGCCCTCGCCGCCCGCCCCACCGCTGCTCCCTTCCTTCGCATTACCGGCGTTGGCCCCTCTCTCGACGCCGTCCGCGAAACCGGCCGCTGCCTTACCGAGCTCGCCCACTCCCTGCGCATCCCCTTCGAATTCCACGCCGTCGGAGAACAGCTCGAAGATCTCAGACCCCACATGCTGCACCGCCGTGTCGGGGAGGCACTCGCAGTTAACGCAGTGAACCGTCTCCACCGCGTCCCCGGGAATCACCTCGGGAACCTTCTCGCCATGATACGCGACCAGGCACCGAACATAGTGACCCTGGTGGAGCAAGAGGCAAGCCACAACGGACCCTACTTTCTGGGGCGGTTTCTGGAGGCGTTGCACTACTACTCGGCGATCTTCGACTCGCTAGACGCAACGTTTCCGGCGGATTCGGCTCAGCGGGCGAAGGTGGAGCAGTACATATTCGCGCCGGAGATACGGAACATCGTGGCGTGCGAGGGGGCGGAGAGGTTTGAGCGGCACGAGAGGCTGGAGAAGTGGCGGAAGATAATGGAGGGGAAGGGGTTCAAGGGCGTGGCGCTGAGCCCGAACGCGGTGACTCAATCGAAGATTTTGCTTGGGTTGTACTCGTGTGATGGGTATAGGTTGACGGATGACAAGGGCTGCTTACTTCTTGGGTGGCAGGATAGAGCCATCGTTGCTGCGTCTGCATGGCGGTGTTGA 1992 0.5387 MINSLCGTLKSESNSKTKLQATSSNDSFLQSKKNATQSSGDIDQTTLTPPSLNLPGLKFELDGDVEVQSPDSSMWESFFADQLDGDFMISSPVRNVPSPQVSSYNCNYNYAHGMQSQSLSGCSPPRFSSSQIGAFNSTHKGKGLSPLHRVFNSPNNQYMQHVENLSLPAIEEFLEDYQGYSSTKVSSEIATSSECFDLSTQIPSSLLDTLTLPNSSRYHGSVDEESSVHAAGSSQLSQESDIYHQMGSMASASLSQALQQERYQEKRQKRQAQQLQQQQQRQQDNMMVPIPIGMEQEQDSGLQLVHLLLACAEAVGKEEYMLARRYLHHLNRVVTPLGDSMQRVAACFTDSLSARLNATLTPKPSKPLSPSNSMEVLKIYQIVYQACPYVKFAHFTANQAIFEAFETEERVHVIDLDILQGYQWPAFMQALAARPTAAPFLRITGVGPSLDAVRETGRCLTELAHSLRIPFEFHAVGEQLEDLRPHMLHRRVGEALAVNAVNRLHRVPGNHLGNLLAMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPADSAQRAKVEQYIFAPEIRNIVACEGAERFERHERLEKWRKIMEGKGFKGVALSPNAVTQSKILLGLYSCDGYRLTDDKGCLLLGWQDRAIVAASAWRC* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0931 663 MobiDBLite consensus disorder prediction 13 52 - -
Pvu1g0931 663 PANTHER GRAS FAMILY PROTEIN RAM1 16 661 - -
Pvu1g0931 663 MobiDBLite consensus disorder prediction 257 283 - -
Pvu1g0931 663 ProSiteProfiles GRAS family profile. 295 662 IPR005202 -
Pvu1g0931 663 MobiDBLite consensus disorder prediction 218 237 - -
Pvu1g0931 663 MobiDBLite consensus disorder prediction 13 54 - -
Pvu1g0931 663 Pfam GRAS domain family 304 662 IPR005202 -
Pvu1g0931 663 Coils Coil 258 285 - -
Pvu1g0931 663 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 16 661 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0931 Pvu-Chr1 16715321 16717523 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0931 298 663 GRAS Transcription Factor Family AT1G66350 44.624 5.53e-100 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu1g0931 GRAS 3.1e-130 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0931 - - gmx:100805039 1073.15