Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0929 ATGGCCAGTGAAAATGGTTTCCAGCTTAGTGTGAAGCTAGGTGAACCAACTCTCGTTCCTCCAGCTGAAGAAACAAAGAAGGGTTTGTATTTCCTATCTAACCTTGACCAGAACATTGCAGTGATTGTGAGAACTGTTTATTGCTTCAAAACTGGTGAGAGGGGAAATGAGAAGGCTGGGAAAGTGCTAAAGAATGCATTGAAGAAGGTTCTTGTCCACTATTACCCTCTTGCTGGGAGGCTTACTATAAGCTCAGAGGGTAAGCTCATAGTGGATTGCACAGGGGAAGGTGCCTTGTTTGTGGAGGCTGAAGCAAACTGTTCAATGGAAGAGATCGGTGACATCACAAAGCCAGACCCTGGAACTCTTGGTAAGCTGGTTTATGACATTCCTGGAGCGAAGCACATTCTTCAGATGCCTCCTTTGGTTGCTCAGGTGACTAAGTTCAAATGTGGAGGTTTTGCTCTTGGGTTGTGCATGAATCACTGCATGTTTGATGGCATTGGTGCAATGGAGTTTGTGAACTCTTGGGGACAAGTAGCCAGAGACTTGCCACTCTCAATCCCTCCAGTACTGGACAGAAGCATACTCAAGGCAAGAAACCCACCAAAGATAGAGCACCTGCATCAAGAATTTGCTGACATAGAAGACAAATCCAACAGTAATAGTTTATACGAAGAGGAAATGGTTTACAGGTCCTTCTGTTTTGATCCTGAGAAACTAAAGGAGCTGAAGATGAAAGCAATGCAAGATGGGGCTCTTGATGCGTGCACAACATTTGAAGTCCTCTCAGCATTTGTGTGGATAGCAAGAACCAAGGCCCTGAAAATGTCACCTGACCAACAAACAAAGCTTCTTTTTGCTGTTGATGGAAGGGCCAAGTTCAATCCCCCTCTTCCAAAAGGGTACTTTGGAAATGGAATTGTGATAACAAATTCTGTGTGCCGAGCTGGGGAACTAACACAAAAGCCTTTGTCATTTGCTGTGGGACTCATTCAAGACGCAATCAAGATGGTGACAGACACCTACATGAGATCAGCAATTGATTACTTTGAGGTGACAAGAACAAGGCCTTCCCTTACTTGCACTCTTCTAATAACAACTTGGTCTAGACTTTCCTTTCACACCACTGATTTTGGATGGGGAGACCCAGTGTTGTCAGGCCCAGTGTCACTGCCAGAGAAGGAAGTGATTTTGTTCCTCTCCCATGGCCAAGAGAGAAGAAATATAAATGTGCTTCTGGGTTTGCCTGCTACTGTCATGAAGATTTTCCAAGATTTGATGCAAATATAA 1293 0.4432 MASENGFQLSVKLGEPTLVPPAEETKKGLYFLSNLDQNIAVIVRTVYCFKTGERGNEKAGKVLKNALKKVLVHYYPLAGRLTISSEGKLIVDCTGEGALFVEAEANCSMEEIGDITKPDPGTLGKLVYDIPGAKHILQMPPLVAQVTKFKCGGFALGLCMNHCMFDGIGAMEFVNSWGQVARDLPLSIPPVLDRSILKARNPPKIEHLHQEFADIEDKSNSNSLYEEEMVYRSFCFDPEKLKELKMKAMQDGALDACTTFEVLSAFVWIARTKALKMSPDQQTKLLFAVDGRAKFNPPLPKGYFGNGIVITNSVCRAGELTQKPLSFAVGLIQDAIKMVTDTYMRSAIDYFEVTRTRPSLTCTLLITTWSRLSFHTTDFGWGDPVLSGPVSLPEKEVILFLSHGQERRNINVLLGLPATVMKIFQDLMQI* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0929 430 Pfam Transferase family 11 427 - -
Pvu1g0929 430 Gene3D - 212 429 IPR023213 -
Pvu1g0929 430 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 10 429 - -
Pvu1g0929 430 Gene3D - 6 211 IPR023213 -
Pvu1g0929 430 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0929 Pvu-Chr1 16607875 16610151 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0929 9 428 Monolignol Biosynthesis Gene Families AT5G48930 34.713 2.14e-83 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0929 K15400 - gmx:100804504 802.357