Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0923 ATGGATCCCAAGAGCTCAAAGCAGCCTCTGGCACAGGAGGTGGTACCAAACTTTCTTAGCCTCCCCCAACAACAATCACCACCACCACAGCAGCAGCAGCAACAAGGTAACAATAACAACATGGGAGAGAACAAGCCAGCAGAGATGAAGGATTTCCAGATAGTGGTTGCTGAGAAGGATGAGAGCAAGAAGCAGTTGGCCCCAAAGAGGAGTTCGAACAAGGACAGACACACCAAGGTTGAAGGGAGGGGAAGGAGGATAAGGATGCCTGCTCTTTGTGCAGCAAGAATCTTCCAGTTGACCAGAGAATTGGGTCACAAATCTGATGGGGAAACCATCCAGTGGCTTCTTCAGCAGGCTGAGCCATCCATAATAGCTGCTACTGGAACAGGTACAATCCCAGCATCTGCTTTGGCTGCTGCTGGCAACTCGGTTTCACCACAAGGGGCCTCTCTTTCATCAGGGTTGCACCAAAAGATTGATGAATTGGGAGGGGCCAATATGGGGTCAGGTAGCAGTAGGACCAGTTGGCAAATGGTTGGGGGGAATTTGGGGAGACCCCATGTGGCCACGGGCCTATGGCCCCCCCATGTCAGTGGATTTGGATTTCAGACATCCTCTGGTCCATCTAATGCCACCCTAGGCACTGAGAGTTCAAATTACCTGCAGAAGATTGGGTTCCCTGGCTTTGACTTGCCTGCTGCTGCCACCAACATGGGTCACATGAGTTTCACCTCAATTTTGGGTGGTGGGGGTACCCAGCAGATGCCTGGTTTGGAGCTGGGGTTGTCCCAGGATGGCCATATTGGTGTCTTGAATCCACTTGCCTTGAGCCAGATTTATCAGCAGATGGGTCAGGCTACTAGAGTGCAGCAGCAGCAACAACAACAACATCAGCAAACTCCTGCAAAGGATGATTCTCAAGGCTCAGGACAGTAG 939 0.5154 MDPKSSKQPLAQEVVPNFLSLPQQQSPPPQQQQQQGNNNNMGENKPAEMKDFQIVVAEKDESKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGNSVSPQGASLSSGLHQKIDELGGANMGSGSSRTSWQMVGGNLGRPHVATGLWPPHVSGFGFQTSSGPSNATLGTESSNYLQKIGFPGFDLPAAATNMGHMSFTSILGGGGTQQMPGLELGLSQDGHIGVLNPLALSQIYQQMGQATRVQQQQQQQHQQTPAKDDSQGSGQ* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0923 312 MobiDBLite consensus disorder prediction 52 84 - -
Pvu1g0923 312 MobiDBLite consensus disorder prediction 1 84 - -
Pvu1g0923 312 MobiDBLite consensus disorder prediction 288 312 - -
Pvu1g0923 312 MobiDBLite consensus disorder prediction 10 44 - -
Pvu1g0923 312 PANTHER TRANSCRIPTION FACTOR TCP20-LIKE 27 311 - -
Pvu1g0923 312 Pfam TCP family transcription factor 72 158 IPR017887 -
Pvu1g0923 312 ProSiteProfiles TCP domain profile. 73 127 IPR017887 -
Pvu1g0923 312 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 27 311 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0923 Pvu-Chr1 16284555 16286510 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0923 1 312 TCP Transcription Factor Family AT3G27010 52.553 3.03e-84 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pvu1g0923 TCP 8.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0923 - - vun:114191990 518.85