Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0914 ATGACCACCGCTTTAAAGCCACCAACCAGGTTGCGCTCCCTCCAACCACCGCCGCTGCTTTTCCCTGGTTCCAAATCGTTCAAGTTCCCAACCACTCAGCTTCCCACAGTAAAATGTAGTCACTCCTCTTTCGAAGTTCGAGAGGTTAGCTATCAACCACCGGGGACTCAGCTTAAACTTCTAAATTCAGTTAGCTTTTCACTTCCAGAGAAAAGTTTTGGTCTAATTTTCGGACAGAGTGGAAGTGGAAAAACAACCCTGTTGCAGCTTCTTGCAGGAATAAGCAAACCAACGTCGGGATCCATTTACATCCAAAAGTATGGGGATGATGGAAATCCGAGTCAAACTGCAGAGCCCTTGGTGCCGGAAAGGGTTGGTATTGTCTTCCAGTTTCCTGAGAGGTATTTTGTCACAGATAATGTGCTTGATGAAGTCACTTTTGGTTGGCCAAGGCAAAAGGGTAACCATCACCTTAGGGAGAATCTTACTCTAGGGCTACAAAGGGCAATTAACTGGGTTGGGTTAAATGGTATATCATTGGATAAAAATCCTCACTCCCTCAGTGGGGGTTACAAACGCCGCCTTGCCTTGGCAATACAATTAGTGCAAACCCCTGATCTATTGATATTGGATGAACCTCTTGCAGGACTCGATTGGAAAGCACGTGCTGATGTTGTGAAGCTTTTGAAGCATTTGAAAAAAGAATTGACGGTGCTAGTTGTTAGCCATGATTTGAGAGAATTTGCGAGTCTAGTTGATCGATCATGGAGAATGGAAATGGGTGGCAACCTTAAACAGGAATTTCTACCACTGTAA 816 0.4473 MTTALKPPTRLRSLQPPPLLFPGSKSFKFPTTQLPTVKCSHSSFEVREVSYQPPGTQLKLLNSVSFSLPEKSFGLIFGQSGSGKTTLLQLLAGISKPTSGSIYIQKYGDDGNPSQTAEPLVPERVGIVFQFPERYFVTDNVLDEVTFGWPRQKGNHHLRENLTLGLQRAINWVGLNGISLDKNPHSLSGGYKRRLALAIQLVQTPDLLILDEPLAGLDWKARADVVKLLKHLKKELTVLVVSHDLREFASLVDRSWRMEMGGNLKQEFLPL* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0914 271 CDD ABC_cobalt_CbiO_domain1 45 261 IPR015856 GO:0005524|GO:0016020|GO:0055085
Pvu1g0914 271 Pfam ABC transporter 61 214 IPR003439 GO:0005524
Pvu1g0914 271 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 44 269 IPR003439 GO:0005524
Pvu1g0914 271 PANTHER ABC TRANSPORTER I FAMILY MEMBER 11, CHLOROPLASTIC 28 267 - -
Pvu1g0914 271 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 261 IPR027417 -
Pvu1g0914 271 Gene3D - 32 268 IPR027417 -
Pvu1g0914 271 PANTHER HEAVY METAL TRANSPORTER 28 267 - -
Pvu1g0914 271 SMART AAA_5 70 262 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0914 Pvu-Chr1 16003146 16021988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0914 45 245 Calmodulin-binding Proteins AT2G36910 26.887 4.62e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0914 - - vun:114196181 495.738