Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0912 ATGTATGTATCGATTATATTAGCCACGTTAACATTAAGCGCCGCCCCTACCATTTATATTTCTTCAAATCTTTTACCACACCCACTTTTCTTTCCCAAACCCTCTTCTCTCACTGCCTACAACTTCTTTTCTCTCTCTCTACCAACATATATAGTAACAAGGAAAATTGGGGTTGGCTTGGTTTCCATGGAGAATTATACCATGTTGTTCCCTTGTCCCAATTCTTCCAGCTACCCCATTTCAACCACTGGTGTGGGAACCTCTCAGCATGGTTTTGGTGGTCAAAGCTCCAATGCATTCCTAGGTCTAAGGCCTAGTAATGAGAGTAGTGGTAGTGATCATGAAAAGAGAGGAGAAGGTGGTAGAGATGGTGCCATGTTAATGTCTCAGATCAGTGGTGGCATTAATGGGAGTGATGAGTCAGGTAGTTTGGGAAATGGTAGTAGTAATAATAGTAACAAAAAGAAAGGGGAGAAAAAGGTTAGAAAGCCTAGATATGCTTTCCAAACAAGGAGCCAGGTTGATATTCTTGATGATGGTTATCGGTGGAGGAAGTATGGCCAAAAGGCTGTTAAAAACAACAAGTTTCCGAGGAGTTACTACCGGTGCACGCATCAAGGGTGCAATGTGAAGAAGCAAGTCCAACGCCTAACCAAAGACGAAGGGGTAGTGGTGACTACTTACGAGGGAGTCCACACTCACCCAATAGAGAAAACAACAGATAACTTCGAACACATTTTGAGTCAGATGCAAATATACACTCCCTTTTGA 771 0.4254 MYVSIILATLTLSAAPTIYISSNLLPHPLFFPKPSSLTAYNFFSLSLPTYIVTRKIGVGLVSMENYTMLFPCPNSSSYPISTTGVGTSQHGFGGQSSNAFLGLRPSNESSGSDHEKRGEGGRDGAMLMSQISGGINGSDESGSLGNGSSNNSNKKKGEKKVRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILSQMQIYTPF* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0912 256 Pfam WRKY DNA -binding domain 178 235 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu1g0912 256 Gene3D WRKY domain 154 236 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu1g0912 256 SUPERFAMILY WRKY DNA-binding domain 169 236 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu1g0912 256 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 130 252 IPR044810 GO:0003700
Pvu1g0912 256 ProSiteProfiles WRKY domain profile. 172 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu1g0912 256 SMART WRKY_cls 177 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu1g0912 256 MobiDBLite consensus disorder prediction 97 166 - -
Pvu1g0912 256 PANTHER WRKY TRANSCRIPTION FACTOR 75-RELATED 130 252 - -
Pvu1g0912 256 MobiDBLite consensus disorder prediction 131 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0912 Pvu-Chr1 15930050 15932342 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0912 165 256 WRKY Transcription Factor Family AT5G13080 88.043 2.92e-58 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu1g0912 WRKY 3.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0912 - - pvu:PHAVU_001G088200g 478.789