Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0896 ATGGATTTCTCCGACTCTTCTTCTGGCCGCAACTCTCTCATCCCCTCCTTCCTCTACTCCTCTTCCTCCAAGACGCTTCCTCTTCACCGCATGCTCCACTCCACCGCTGTCTCCGCCGCGGCACCCTCGCCACCGCCGGCTAACCTCGATGCGGGATCGCGCGGCCTTATGATTCCCTCTCCCAGCGAGTCACGCAAGATCGAGCTCTACTCGCCCGCCTTCTATGCTGCCTGTACTGCTGGTGGAATCCTCAGCTGTGGCCTCACTCACATGACCGTCACTCCTCTTGACCTTGTCAAGTGTAATATGCAGATCGACCCTGCTAAGTATAAGAACATCTCGTCTGGGTTTGGTGTTTTGCTCAAGGAGCAGGGCTTCAAGGGCTTTTTCCGTGGTTGGGTGCCTACCTTGCTTGGTTACAGTGCCCAGGGTGCTTGCAAATTCGGATTCTACGAGTTCTTTAAGAAGTATTACTCTGATATTGCTGGCCCAGAGTATGCGAGCAAGTACAAGACCTTGATCTACCTTGCTGGTTCCGCTTCTGCGGAGGTTATTGCTGATGTTGCTCTTTGCCCTTTCGAGGCTGTGAAGGTCCGTGTCCAAACACAGCCTGGTTTTGCTAGGGGTTTGGCTGATGGGCTCCCAAAATTTGTGAAATCTGAAGGAACCTTGGGGCTGTACAAGGGAATAGTGCCTCTGTGGGGACGACAGATTCCATACACAATGATGAAGTTTGCTTCATTTGAGACCATAGTTGAGCTGATCTATAAGCATGCCATTCCTACTCCAAAGAATGAGTGCAGCAAAAACCTGCAACTCGGTGTCAGTTTTGCTGGTGGATATATTGCTGGTGTGCTTTGTGCAATCGTGTCTCATCCTGCTGATAATCTTGTCTCTTTTCTGAACAATGCTAAAGGAGCAACAGTTGGTGATGCGGTGAAGAAGTTTGGTGTCTGGGGTCTCTTCACCCGCGGTCTTCCCCTCCGTATTGTGATGATTGGAACTCTTACTGGTGCCCAATGGGGAATATATGATGCTTTCAAAGTCTTTGTTGGGCTGCCAACAACTGGTGGTCCTGCTCCTGCCGCTGCTCCAGCTCCTGGTTCTGAGCTAGTAAAGGCGTAG 1125 0.512 MDFSDSSSGRNSLIPSFLYSSSSKTLPLHRMLHSTAVSAAAPSPPPANLDAGSRGLMIPSPSESRKIELYSPAFYAACTAGGILSCGLTHMTVTPLDLVKCNMQIDPAKYKNISSGFGVLLKEQGFKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYASKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLADGLPKFVKSEGTLGLYKGIVPLWGRQIPYTMMKFASFETIVELIYKHAIPTPKNECSKNLQLGVSFAGGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKKFGVWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGPAPAAAPAPGSELVKA* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0896 374 Gene3D Mitochondrial carrier domain 53 164 IPR023395 -
Pvu1g0896 374 Gene3D Mitochondrial carrier domain 165 352 IPR023395 -
Pvu1g0896 374 ProSiteProfiles Solute carrier (Solcar) repeat profile. 271 350 IPR018108 -
Pvu1g0896 374 SUPERFAMILY Mitochondrial carrier 76 346 IPR023395 -
Pvu1g0896 374 Pfam Mitochondrial carrier protein 76 159 IPR018108 -
Pvu1g0896 374 Pfam Mitochondrial carrier protein 172 258 IPR018108 -
Pvu1g0896 374 ProSiteProfiles Solute carrier (Solcar) repeat profile. 73 157 IPR018108 -
Pvu1g0896 374 ProSiteProfiles Solute carrier (Solcar) repeat profile. 170 254 IPR018108 -
Pvu1g0896 374 PANTHER MITOCHONDRIAL PHOSPHATE TRANSPORTER 6 367 - -
Pvu1g0896 374 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 6 367 IPR044677 GO:0005315|GO:1990547
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0896 Pvu-Chr1 15489616 15493398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0896 7 366 Chloroplast and Mitochondria Gene Families AT5G14040 79.620 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0896 K15102 - gmx:548006 678.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0896 1 15489616 15493398 Pvu1g0896 1 15489616 15493398 ECH
Pvu1g0896 1 15489616 15493398 Pvu4g0757 4 10649105 10651403 PCT