Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0864 CCATTTATCAGTGAGGAGTTTAAGATCGATTCCTCCTGGAAAGACATGGACAGTAAGATGGAGCAGCCACCACCATATGTACACATAAGACGCAATATATACTTAGTAAAGAAGAAACGTAGTAATGTGGATGATGGTGCAGGGTGCACCAGTTGCAGTTCTACATGTTCTGATGATTGTGTGTGCAGGGTTCAATGCATAAGTTGCTCAAAAGCATGTCGCTGCTCTGAAAATTGCAATAATCGTCCATTTCGCAAGGATAAAAAGATCAAGATAGTCAAGACTGAACATTGTGGATGGGGAGTGGAGGCCGCCGAAACCATTGATAAAGGTGGATTTATAGTTGAGTATATTGGCGAAGTAATTGACGATGCTTTATGTGAGAAGAGGCTCTGGGACATGAAATACATGGGTGTACATAATTTTTACATGTGTGAGATTCGGAAAGACTTCACAATCGATGCAACTTTCAAAGGAAATACTTCACGCTTTTTGAACCATAGCTGCGATCCCAACTGTGTTTTGGAAAAGTGGCTGCATTATTTTCTCACTCTTCAGAGATTAATCAACAGATATGCTGTTTCCTAG 588 0.4065 PFISEEFKIDSSWKDMDSKMEQPPPYVHIRRNIYLVKKKRSNVDDGAGCTSCSSTCSDDCVCRVQCISCSKACRCSENCNNRPFRKDKKIKIVKTEHCGWGVEAAETIDKGGFIVEYIGEVIDDALCEKRLWDMKYMGVHNFYMCEIRKDFTIDATFKGNTSRFLNHSCDPNCVLEKWLHYFLTLQRLINRYAVS* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0864 195 SUPERFAMILY SET domain 13 179 IPR046341 -
Pvu1g0864 195 Pfam SET domain 99 177 IPR001214 GO:0005515
Pvu1g0864 195 PANTHER SET DOMAIN PROTEINS 1 179 - -
Pvu1g0864 195 SMART set_7 88 195 IPR001214 GO:0005515
Pvu1g0864 195 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR3 1 179 - -
Pvu1g0864 195 Gene3D SET domain 2 189 IPR046341 -
Pvu1g0864 195 ProSiteProfiles AWS domain profile. 45 88 IPR006560 GO:0005634|GO:0018024
Pvu1g0864 195 ProSiteProfiles SET domain profile. 88 195 IPR001214 GO:0005515
Pvu1g0864 195 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 178 IPR025787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0864 Pvu-Chr1 14870712 14872316 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0864 69 174 C2H2 Transcription Factor Family AT2G23740 39.496 9.93e-19 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pvu1g0864 SET 2.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0864 - - pvu:PHAVU_001G083700g 402.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0864 1 14870712 14872316 Pvu1g0864 1 14870712 14872316 ECH