Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0858 ATGTCAAGTACTCTTGCAGCAATATTTGGAGGAGCTGCAGGAGCCGTGGCATTGGTAGGGATTGCTATACTTATATGGTTTTGTTTGTCTCGCCAGAGGAATGTTTCTAGGACTTCAGAGACAGGGTCCTCTGATCCTTCTCAAGTGGGAAGACATGGTGCAATTGAGTTGCCTAGAGATACTAGGCGTTTTGAGATGGAAGAACTATCTCTGGCCACAAAAAGTTTCAGCGAAAAAAATTTGATTGGAGAAGGGAAATTTGGGGAGGTTTACAAGGGTTTACTTCAAGATGGGATGCTTGTAGCCATCAAAAAACGCCGTGGACTCGCTAGTCAGGAATTTGTGGATGAGGTACGTTATCTCTCAGCTATTCACCACCGGAATCTCGTCAGTCTTTTAGGCTACTGCCAGGAGAACAGTCTTCAGTTTCTTATATACGAATATGTGCCTAATGGAAGCGTCTCCAGTCACTTGTATGGCGCTGGTCAACAATCTCGAGAGAAGCTAGAATTCAAGCATAGACTTTCAATAGCTCAAGGTGCAGCTAAAGGTTTGGCTCATCTTCACTCTCTGAGTCCCCGTTTGGTGCATAAGAATTTCAAAACAGCTAATGTTCTTGTGGATGAAAACTTCATTTCTAAGGTGGCAGATGCCGGACTCCGCAATTTTTTGGGGAAAATTGACATTGCAGGCTCCTCTTCTCAAGCGGCAACAGATGAAATATTCCTTGCATCAGAGGTGAGAGAGTTCAGACGATTTTCTGAAAAGAGCGATGCATACAGCTTTGGGGTATTTTTGCTGGAATTGTTAAGTGGGAAAGAAGCAACAGGGTCACCATTTCCGGACTCTAATCAGAATTTGGTTGAATGGGTGCTAAGCAATGAAGACCGTGGCATGATGTCTTACACCATTGATCGGACATTGGAGAGTAGTTGTACACCTGAAGGAATGGAAGATTACATCATGCTCATGATCAGATGCATAGACCCTTCAAGTGAGAAAAGACCTGCCATGAGCTATGTGGAAATGGAACTTGATCGAATCCTAGAGAAGGAAATGAACCTGACAACAATCATGGGAGAAGGAACCCCAACTGTGACCCTTGGAAGCCAGTTATTCAAATCAACAACATGA 1134 0.4383 MSSTLAAIFGGAAGAVALVGIAILIWFCLSRQRNVSRTSETGSSDPSQVGRHGAIELPRDTRRFEMEELSLATKSFSEKNLIGEGKFGEVYKGLLQDGMLVAIKKRRGLASQEFVDEVRYLSAIHHRNLVSLLGYCQENSLQFLIYEYVPNGSVSSHLYGAGQQSREKLEFKHRLSIAQGAAKGLAHLHSLSPRLVHKNFKTANVLVDENFISKVADAGLRNFLGKIDIAGSSSQAATDEIFLASEVREFRRFSEKSDAYSFGVFLLELLSGKEATGSPFPDSNQNLVEWVLSNEDRGMMSYTIDRTLESSCTPEGMEDYIMLMIRCIDPSSEKRPAMSYVEMELDRILEKEMNLTTIMGEGTPTVTLGSQLFKSTT* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0858 377 SUPERFAMILY Protein kinase-like (PK-like) 56 342 IPR011009 -
Pvu1g0858 377 Gene3D Transferase(Phosphotransferase) domain 1 149 362 - -
Pvu1g0858 377 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 376 - -
Pvu1g0858 377 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 1 376 - -
Pvu1g0858 377 ProSitePatterns Protein kinases ATP-binding region signature. 82 105 IPR017441 GO:0005524
Pvu1g0858 377 ProSiteProfiles Protein kinase domain profile. 76 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0858 377 Pfam Protein tyrosine and serine/threonine kinase 79 344 IPR001245 GO:0004672|GO:0006468
Pvu1g0858 377 Gene3D Phosphorylase Kinase; domain 1 42 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0858 Pvu-Chr1 14604051 14608321 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0858 63 371 Receptor kinase-like Gene Family AT3G46290 37.963 3.29e-59 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Pvu1g0858 PK_Tyr_Ser-Thr 3.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0858 - - gmx:100305436 662.914