Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0848 ATGGAGAGAAGCTGGGAATGGGATGATGCATGGATGATAGATACGGATACCAGAGTACTCAACCCCGAAAATCCCTTTCATTCTTTCTCTTCACCTTCGCCATCTCCTTGTGTGTCCCCTTCTTCCAGTTTCAGTGAGAGCGTAGATTCTTCTCTTCCTCCTTTTATCTTCCGCACTCCGAATCAATTGCGATACCCTCACCGGCTGAACTCGCTCCCCATTTCTGTGCCCTCAATCAGCGCGGGCAGAATGAAAGGGGGGCGATCGCACCGCCCTCAGAGCTCTGACCCACCGGATGAGTGGGTGGACGGCTCGTGGACGGTGGATTGCATCTGCGGCGTGACCTTCGATGACGGCGAGGAGATGGTGAAGTGCGACGAGTGCGGCGTGTGGGTCCACACCCGCTGCTCGCGGTACGTGAAGGGCGACGACACCTTCGCCTGCGACAAGTGCAAGGCCAGGCACAACAACAACCCGGAGGAGACCGAGGTGGCGCAGTTCCTCGTGGAACTCCCCACCAAAACCATCTCCATGGACAACAAAAAGGCCCTCCCCTCTAGGCCCAGGCTCTGGACCGATAAGCCCATCCAGGACCGGGTCCACGTCCAGGGCGCACTCGGAGGTGACCCTTCCATCTTTTCCTCTCCCTCTGTCTCCTCGATTTTCTCCCCTCACCTCTGGAAGGCCTGTGGGTACGTTCCCAAGAAGTTTAATTTTCAGTACAAGGAGTTTCCCTTCTGGAGCGAAAACGATGATGATGGTAAGGATAACGTTAACGAGAGTTTACACGAACAAACACAAGCTCAACCACAGGCACTGGATAATAACAAGAATGGGGCTGGGACTCTTGTTTATTTGTCTAAAGACGGTGATAATAATGGTTCTGCTCTTCTATTGGATCCTTCATCTGCTGATGCGAGATCTGGCCACGCCAAGGAAACCGAAACGGGCAAGTTTGGCAGCGAGGATGTGCCGCCACGTTTCCACAGTGAGGTGAAGAAGGAGAGGACTCTGCTGAGACCTCCTGTTGTTCATCACAGTAAGCGCAGCAAAGGGGATTTCGGGTCTTCAAATTCAAAAGACCGTAGCGGGAAGAAGCGGGTTAGGACTACTTCTGACAGAGAGGTGGATCCCAGGAGGAGAACTCTGCATTCTTCTAAATCAGTATTTACACCCACTGGTGAGGCGAAACAAGTGGACTTTTATGAGGACAGAGGACCAAGGATTTTAAAGGCTGACACTCGGAGCATAAAGAATAAAAACTTGAAAGAAATAGTTGTTCAAGAATGTGTTTCTGATGATTATTTGGCTGCTGATACCATCATGGAGGAGCCAAATAATAACCTAACAACTACGGAGGATTCTTTGGAACCATTATATCCTGACATGACTAGGCATGGTGTTTCTGTTGTAGATGTACTAGCAGAAGAGAAGCCTAATCATAAACCTCCTACTGTGGTGGAGATGTCTTCTAAGACTGATGATGCCGTTACATCAGCTTTAAATCAGAATAATGTTGGAAATGCTTCAGCTAAAGAAAAGGATGGGGATTGCTCAGTAGCTGATAATGCAGATGATAGTTTAGTAGTAAGAAGTGCTGCAAGTCCTCAAACAGAAGGTCATTGCAGTTCTGCTCCACAGCTCGTGGATAACCAAGTTTCTCAAGATCTTGACCGCATGCGTACAAGCTCTACAAAATGCAAAGTTAAGATGAAGAGGGAAGATGACATTGATAATTTTAAGAAGCCCTCAATTTTTCATCCTTCTCCTACCAGTGATCTTAAAAACAATGAAAAACTATCTGATCACAAATCTGATGTTAAAGTGAACGAAGCACCAGTTCCTACTTTACCATCATGTGAAAATAAGGTCGGCAGTGTTGACATTTCATCCGAAGTAATACCTGCTGATCATATCAATAAGCCCAATGAATTATCTGGTGATTTTTGTCCTAGAAAACAAGAACTGGAGGGTTATGAAGGTTCCTTGGAAACACAAAAGGTATTTTCTGAAACAAAAGATGGTTCAGATTCTGCTAAAGATCCATCAAAATCTGAAGCACTCGGATGTCCACCTAAAGTGCTAGCATGTGTTGGAAAGTCATCTCCAACTTCGTCAACCATGAACTCCAAATCATTGGGTCATGATATCAAATCTGAAGATACTGAAACTGCTAATCCTTTTACGAAGCATGGAGTGATTACTGATTGTAGTGTTCAGATAAAGAATGAAAATTGTATAAGTAATGTTGCCAGGGATGAAAATCCAAAGAAGTCTGTTAGAGAGCGGCCAAAATCCTCCTTGAATTCCAATTCAAAGGGATTGCATTCAAGCAGGAGTGTGCATAATTCTGTCTCCAAGCAAGCGAGTTCAGATCCGAGAGATTCTGTTCCTGTATCTTCTAAGTCTTTGATACATCAGACTGCAAGTATATTAGGCTCTAGTGAGTCCAATGCATCATTGCCCAATCAGAAGGTTCTACAAGTTCAGAATAAGATTTTATCTTCAGCACCACAGAAAGTTGAAAAACTTAACCAAACAAACACCGCCACTTCCTCTAAGTTGAACCAAGGTCATGTGCCGTCAGTGAATCCTTCTCCAATATCAAATTCTTCAATGTTAAGTGATGAAGAGCTCGCTCTGCTATTGCACCAAGAACTGAATAGTTCACCCCGTGTACCTCGAGTACCACGAGCACGCCATGCAGGTAGCTTGCCCCAGCTGAGTTCTGCTAGTCCTACAAGCATGCTAATGAAGCGTACATCGGGTGGAGGAAAGGATCACTATTTGGTATCTAGACGGAAACACAAGGATGCATCTAGAGATGGGTCTGGAAGTTCTCGTGAACTGGAAGATGAAGCTAAAAAGATAGAGAAGGAGAAGTGTCCATCCTCTTCTGATCAGAGGAAACAAGATATGTCATATATGGAAGATGCTCCTGCAAGGGAAGAAGGCCTTGCATCTGTGACAGCAGCAAACTCCATCACAAACAACACGGTTTCTTCCAATTCTGCAATTGCAAACAGTGACCCATCCTCTCCTCCCGGTGATCAGAATCTATCATCTATGCGTAACTCACCTAGGAATATCTCTGATGATGATACAGCGACTGCTGGAAGGCCAGTTCATCGCACCTTACCTGGTTTAATCAATGAAATTATTATTATGAGCAAAGGCAGGCGCATGACCTATGAGGAACTCTGTAATGCTGTTCTACCGCACTGGCATAACTTGAGGAAACACAATGGTGAGCGATATGCATACTCAAGTCACTCCCAGGCTGTTCTTGATTGTTTGAGGAACCGGCAAGAATGGGCAAGGTTGGTTGATCGTGGTCCAAAGACAAATTCTAATAGAAAAAGGCGTAAGCTGGAGGCTGAAGAATCTGATGATAATGGATATGGCAAGGGAAGAACTCCGAAAGAGGCTGAAGGGAAGAACTTTGAGTTGCAAAAGGAAGAGTTCCCCAAAGGCAAGCGTAAAGCTCGAAAACGTAGACGCCTCGCTCTTCAGGGAAGAGCAGTGAAGGATGTGAGGAGGAGACAAAAAGCTGACTCCCTAACGGATGAGGATGTTGGTCCATTCTCCAATTCTAGTGAAGAGAGCATGTTCAGTGAAGATGAAATTCAGGTTGGCAGAATATGCCCAGCAGGAAGTACATCAGATGAGGCAGGTAGTGCCTAA 3684 0.4571 MERSWEWDDAWMIDTDTRVLNPENPFHSFSSPSPSPCVSPSSSFSESVDSSLPPFIFRTPNQLRYPHRLNSLPISVPSISAGRMKGGRSHRPQSSDPPDEWVDGSWTVDCICGVTFDDGEEMVKCDECGVWVHTRCSRYVKGDDTFACDKCKARHNNNPEETEVAQFLVELPTKTISMDNKKALPSRPRLWTDKPIQDRVHVQGALGGDPSIFSSPSVSSIFSPHLWKACGYVPKKFNFQYKEFPFWSENDDDGKDNVNESLHEQTQAQPQALDNNKNGAGTLVYLSKDGDNNGSALLLDPSSADARSGHAKETETGKFGSEDVPPRFHSEVKKERTLLRPPVVHHSKRSKGDFGSSNSKDRSGKKRVRTTSDREVDPRRRTLHSSKSVFTPTGEAKQVDFYEDRGPRILKADTRSIKNKNLKEIVVQECVSDDYLAADTIMEEPNNNLTTTEDSLEPLYPDMTRHGVSVVDVLAEEKPNHKPPTVVEMSSKTDDAVTSALNQNNVGNASAKEKDGDCSVADNADDSLVVRSAASPQTEGHCSSAPQLVDNQVSQDLDRMRTSSTKCKVKMKREDDIDNFKKPSIFHPSPTSDLKNNEKLSDHKSDVKVNEAPVPTLPSCENKVGSVDISSEVIPADHINKPNELSGDFCPRKQELEGYEGSLETQKVFSETKDGSDSAKDPSKSEALGCPPKVLACVGKSSPTSSTMNSKSLGHDIKSEDTETANPFTKHGVITDCSVQIKNENCISNVARDENPKKSVRERPKSSLNSNSKGLHSSRSVHNSVSKQASSDPRDSVPVSSKSLIHQTASILGSSESNASLPNQKVLQVQNKILSSAPQKVEKLNQTNTATSSKLNQGHVPSVNPSPISNSSMLSDEELALLLHQELNSSPRVPRVPRARHAGSLPQLSSASPTSMLMKRTSGGGKDHYLVSRRKHKDASRDGSGSSRELEDEAKKIEKEKCPSSSDQRKQDMSYMEDAPAREEGLASVTAANSITNNTVSSNSAIANSDPSSPPGDQNLSSMRNSPRNISDDDTATAGRPVHRTLPGLINEIIIMSKGRRMTYEELCNAVLPHWHNLRKHNGERYAYSSHSQAVLDCLRNRQEWARLVDRGPKTNSNRKRRKLEAEESDDNGYGKGRTPKEAEGKNFELQKEEFPKGKRKARKRRRLALQGRAVKDVRRRQKADSLTDEDVGPFSNSSEESMFSEDEIQVGRICPAGSTSDEAGSA* 1228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0848 1227 MobiDBLite consensus disorder prediction 579 605 - -
Pvu1g0848 1227 MobiDBLite consensus disorder prediction 306 384 - -
Pvu1g0848 1227 MobiDBLite consensus disorder prediction 905 919 - -
Pvu1g0848 1227 MobiDBLite consensus disorder prediction 891 985 - -
Pvu1g0848 1227 MobiDBLite consensus disorder prediction 660 728 - -
Pvu1g0848 1227 SMART PHD_3 109 152 IPR001965 -
Pvu1g0848 1227 MobiDBLite consensus disorder prediction 252 385 - -
Pvu1g0848 1227 MobiDBLite consensus disorder prediction 926 979 - -
Pvu1g0848 1227 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 95 159 IPR013083 -
Pvu1g0848 1227 MobiDBLite consensus disorder prediction 765 802 - -
Pvu1g0848 1227 MobiDBLite consensus disorder prediction 22 43 - -
Pvu1g0848 1227 MobiDBLite consensus disorder prediction 699 713 - -
Pvu1g0848 1227 MobiDBLite consensus disorder prediction 1191 1205 - -
Pvu1g0848 1227 MobiDBLite consensus disorder prediction 261 282 - -
Pvu1g0848 1227 MobiDBLite consensus disorder prediction 80 101 - -
Pvu1g0848 1227 MobiDBLite consensus disorder prediction 1109 1157 - -
Pvu1g0848 1227 MobiDBLite consensus disorder prediction 1171 1188 - -
Pvu1g0848 1227 MobiDBLite consensus disorder prediction 750 802 - -
Pvu1g0848 1227 ProSitePatterns Zinc finger PHD-type signature. 110 151 IPR019786 -
Pvu1g0848 1227 MobiDBLite consensus disorder prediction 1001 1033 - -
Pvu1g0848 1227 MobiDBLite consensus disorder prediction 1001 1043 - -
Pvu1g0848 1227 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SET-26-RELATED 84 1223 - -
Pvu1g0848 1227 SUPERFAMILY FYVE/PHD zinc finger 98 156 IPR011011 -
Pvu1g0848 1227 MobiDBLite consensus disorder prediction 1109 1227 - -
Pvu1g0848 1227 PANTHER UNCHARACTERIZED 84 1223 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0848 108 151 PHD Transcription Factor Family AT5G22260 44.681 3.58e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0848 - - gmx:100799209 1786.16