Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0841 ATGGGGAGCAGAACCTACTCCGCCAATCCAGCCGATTACAAGCTTCTAGAAGAAGTTGGTTACGGCGCCAGCGCCACGGTCTATCGAGCAATCTACCTTCCCTACAACGAGGAGGTCGCCGTCAAGTGTCTGGATCTGGATCGCTGCAACAGCAATCTCGAAGACATAAGGAGGGAGGCGCAGACCATGAGCCTCATCGAGCATCCCAACGTCGTCAGGGCCTTCTGCTCCTTCGTCGTCGAGCGAAGTCTGTGGGTAGTCATGGGATTCATGGCGCAGGGCTCCTGCTTGCACCTCATGAAGGCGGCGTATCCCGAAGGATTCGAAGAGGCCGCCATCGGATCTATCCTCAAGGAAACTCTCAAGGCGCTCGAGTACCTCCACCGACATGGACACATTCACCGCGACGTTAAGGCCGGCAATATTCTCCTCGATTCCAACGGCCAGGTCAAGCTCGCCGACTTTGGTGTTTCCGCTTGCATGTTCGACACTGGTGACCGCCAGCGCTCCAGGAACACCTTCGTCGGAACTCCCTGCTGGATGGCGCCGGAGGTGCTGCAGCCTGGAACCGGTTATAATTTCAAAGCGGATATTTGGTCTTTTGGAATCACGGCGTTGGAGTTGGCTCATGGTCACGCACCTTTCTCCAAGTATCCTCCCATGAAGGTTCTTTTGATGACAATTCAGAATGCTCCTCCTGGGCTTGATTATGATCGTGACAGAAAGTTCTCCAAGTCTTTTAAGGAAATGGTTGCTATGTGCCTGGTAAAAGATCAAGCAAAGAGGCCATCTGTGGAGAAGTTGCTCAAACACTCCTTTTTCAGACAAGTGAAGCCTCCAGAGCTTTCTGTTAAGAAATTATTTGCTGATTTACCACCCCTGTGGAACCGTGTCAAATCCCTCCAGCTTAAAGATGCAGCTCAGCTAGCACTGAAGAAAATGCCTTCTGCAGAACAAGAAGCTATATCTCAAAGTGAATATCATCGGGGAGTTAGTGCATGGAACTTCGATATTGATGATTTGAAAGCTCAAGCTGCATTGATGCAGGACGATGATGATATTGCAGAGATGAGGGAAGAAGATGAAAACAAATTCTTCAGCTCTTACAAGGGTACAAGTGATTTCCAGTTTACTCTGGACAAAAAGAATTCAAAAAACTTGCAACAAGATGAGTTTGCATTACAAGTAGGTAGTAACGACATACCACAGAGTGAGAAGAGAAATGGATCAGTGGCTGAAGCAACATCGTCTACTTCAGAGAATGATATGGGAACAAGCAAAATTAAATCACAATCAGTGAAACTTGGTAAAACCCAAAGTGGACCCCTGGTGCCTGGCTCAGTGCTTGGTCATTCTTTATCTGAAAAAGGGCGTGCATTTGAAAGGTTTGAGAATGAAAATCAGTTATCAAGCGAGAAAAGTAATCGTGATATTCGACGAGCTCCAAGCTTTAGTGGTCCATTAATGCTTCCAAACCGAGCTTCAGCAAATAGTTTATCAGCTCCAATAAAATCTTCTGGAGGATTCAGAGATTCCTTGGATGATAAATCTAATAAGGCTAATCTAGTGCAAATTAAAGGACGGTTTTCAGTGACATCAGAAAATTTAGATCTGGTGAAGGATATTCCTGTAAGTTCAGTTTCACGCCGATCGTCACAGGGGTCTCCAATGAGGAAATCTGCCAGTGTTGGTGATTGGATGGTGGATTACAAACAGATGCCAATTGGTCAGTCCTCCAATGATTCTTCCAATATCAATATTCCTGCATCATTTCTAGTGCCTCATCTTCATAATCTTTTCCAGCAGACATCAATTCAACAGGATCTTATAGTGAATATGTTGAATGGCTTGCAAACTGCTGAGGCAATTGATGCTTCTCAGAATGGAAAGTTGCCGCCATTGCCTCGCAATTCAGAAAACAATGGAAGTGTTGATACAGCAGTTTCAGAGAGGGAACATCTGCTGCTGGCCAAAATTTCAGAACTCCAATCTCGGATGATTAATTTGACCGATGAACTAACTTATGAGAAGTTAAGATACGTGCAGTTACAACAACAGCTAGCTGCTGTCTACAGCCAAGAACAAAATGGGGAAAGAGAGGAATATGCATGA 2112 0.456 MGSRTYSANPADYKLLEEVGYGASATVYRAIYLPYNEEVAVKCLDLDRCNSNLEDIRREAQTMSLIEHPNVVRAFCSFVVERSLWVVMGFMAQGSCLHLMKAAYPEGFEEAAIGSILKETLKALEYLHRHGHIHRDVKAGNILLDSNGQVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGTGYNFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDRKFSKSFKEMVAMCLVKDQAKRPSVEKLLKHSFFRQVKPPELSVKKLFADLPPLWNRVKSLQLKDAAQLALKKMPSAEQEAISQSEYHRGVSAWNFDIDDLKAQAALMQDDDDIAEMREEDENKFFSSYKGTSDFQFTLDKKNSKNLQQDEFALQVGSNDIPQSEKRNGSVAEATSSTSENDMGTSKIKSQSVKLGKTQSGPLVPGSVLGHSLSEKGRAFERFENENQLSSEKSNRDIRRAPSFSGPLMLPNRASANSLSAPIKSSGGFRDSLDDKSNKANLVQIKGRFSVTSENLDLVKDIPVSSVSRRSSQGSPMRKSASVGDWMVDYKQMPIGQSSNDSSNINIPASFLVPHLHNLFQQTSIQQDLIVNMLNGLQTAEAIDASQNGKLPPLPRNSENNGSVDTAVSEREHLLLAKISELQSRMINLTDELTYEKLRYVQLQQQLAAVYSQEQNGEREEYA* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0841 703 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Pvu1g0841 703 Gene3D Phosphorylase Kinase; domain 1 3 89 - -
Pvu1g0841 703 Gene3D Transferase(Phosphotransferase) domain 1 94 325 - -
Pvu1g0841 703 MobiDBLite consensus disorder prediction 395 448 - -
Pvu1g0841 703 MobiDBLite consensus disorder prediction 395 438 - -
Pvu1g0841 703 Pfam Protein kinase domain 13 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0841 703 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 2 696 - -
Pvu1g0841 703 SUPERFAMILY Protein kinase-like (PK-like) 12 326 IPR011009 -
Pvu1g0841 703 ProSiteProfiles Protein kinase domain profile. 13 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0841 703 MobiDBLite consensus disorder prediction 460 481 - -
Pvu1g0841 703 CDD STKc_OSR1_SPAK 12 274 - -
Pvu1g0841 703 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 2 696 - -
Pvu1g0841 703 SMART serkin_6 13 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0841 703 MobiDBLite consensus disorder prediction 460 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0841 Pvu-Chr1 13381790 13389976 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0841 6 695 MAP Kinase Kinase Kinase Kinase AT4G10730 66.571 0.0 913
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Pvu1g0841 Pkinase 1.3e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0841 - - gmx:100783699 1290.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0841 1 13381790 13389976 Pvu4g0959 4 21409395 21416392 PCT