Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0835 ATGCATCCACAGGTCCACTTGCTGGGTCAAGGAATTGTAGGTGAAGCCGCTTTCACGGGAAAACACAGTTGGGTGCATTCAGATGGTCAAACTCATTATTGGAATCTGTCTGGGCAAGATATTTGTGAGGATGATTCTTGTTTGCTTCAACAGTTTTGCTCTGGAATAAAGACTATTGTGGTCATACCTGTCAAAGCATTAGGAGTGATACAGTTTGGATCCAGAAATAAGATTTTGGAAAGAGTGGAATTTTTGGAGCAAACACAAAGCATGCTCACAGAAATAGATGATGATGATATGGGTATGTTTGACATGTCAGAAAATGCAGTTTTACCACTACTCTACCAAAGTAATGATTTAAATGGGATGTTGGCTTCCGTTTCTTCTGCTAGTCCCAACGATCCCTTCCCTACTCATTATAAAAACTATGAAGATGCAGTGGCTTCATTTCAAGGAGATTCTTCGTATCTTGGTGACCAATTGAAAGGTACCATGGAAGCACAAGTTGTATTGTCAGAAAGGAATAGTACTGATGTTCTTTTGAAGCCTAACACTTCTACAGACAACTTAATTGCCAAAACCCCTTATCTTGGTGTATGTGATGGTGAATTATCTTCTTTTGATTTATTGGAGCAACAATTGGTTTCCAGTGTAAGGGCACAAGATGTTGCAGATGCGTGTTTTACGAATGAAAATGTATTTGCTACCTGCAAACTTCCAGTTCAGGATTCGACATTGGTCCCATTGTGCAGTACGGATGGAGGGTCATTTCAAGGAAAATTACAATATTCAAATCAGTCTAGTGTTGTGACAGACGTTGAATTTTCCTCTAGTTCACATGCATTGCATGGACACTCTGAGAACATAGAGCCAGTTGACATGTCAGAAGAAATTTTGAAGTTCAGCTCCATGGATGATCTTTGCCACTGGTTTGGTCCTTCTTCAGAGGATAGCATCTGCAAAGCAGTAATGACATTGGATAACACCTTTTCTGAATCAAGAGAATTTAATCCCACTTCCTTTGATCTGGTCGGAAGTAGTACTTTAAATGATGTTTTATTGACAGGCCTAGCTGTGTATAATTCAAACTCAGATGGGAATGAAACATCTGTGGTTATGCATAACGCTGAAAAAGGTACCTTGGATGTCATGGAAACTGATTTTAGCTATGACCAAGCCGATGAATGGTGGAGGAATACGCTTACACCAGTGGTGAGTGGTGTTACTGATACTGGCTTTTCTGAATGCATATCACAGTTGAATTCTGATACTCTGCCAGGCACCCGGAAGAGATTATTCTCACAGTTAGGAATTGAAGAGCTTTTGAGGAGTGGAGCAAACTACAATCCCATCAATAGTTCTGTATTTGAGTGTTGGTTGTCACCCAATAAGAGGCAGACAGTAGAATCTTCATCTGTGAATGGAAGTACAATACATTTCACCAACCTTGATAGATCTGGGACGAGATCAGACTTGATGCAACCTCTTTGTGACTTAGGCAGCACAAACAATCTTCCAAGCAAGAAAGATACATTCTCAAAATTACAAGCAACCACTTTGGTTGATGATAGCCATAGCATTAATGTTGGAAAGGCTGTTCCACAACACCCTCAAAAGCCAGAGGAACAAGCAAAGCCCACCAATAAGAGGGCTAGGCCAGGGGAGAGTACTCGACCACGGCCAAAAGATCGTCAGCAAATCCAAGACTGTATTAAAGAGTTGAGAGGAATCATCCCCAATGGTGGAAAGTGTAGCATTGATTCTTTGTTAGACCGCACCATCAGATACATGCTTTTCTTACAAAGTGTCCTCAAGTATACAGACAAGCTACAAGAACCAAGTGAGCCGAAGCTTATTGAACAGGAAAATGAAGTGGTTCTAAAAGACAGTGGTGTGGCTGACAGCAAAAACTGTGGCATTACATGGGCATATGAAGTGGGGCACGAAACAATGCTATGCCCCATTATAGTTGAGGACATGAGTCCACCAGGCCAAATGCTTATAGAGATGCTTTGTGAGGTGCAGGGTATATTCCTTGAGATAATTGATATCATTCGGGGTTTTGGACTGAATATCTTGAAAGCCAAGATGGAAAGAAAGAAGAACAAACTATGGGCACGCTTTATTGTTGAGGCAAACAGACACGTGACAAGGATAGACGTGTTTTGGTCCCTTGTCCATCTTCTACAACAAACAAACACCTCTGGCATTGATTCTTCTAATAAGCATTGGGATGCTCTTCATGCCAATAGCCTCAGGTCCTAG 2265 0.4124 MHPQVHLLGQGIVGEAAFTGKHSWVHSDGQTHYWNLSGQDICEDDSCLLQQFCSGIKTIVVIPVKALGVIQFGSRNKILERVEFLEQTQSMLTEIDDDDMGMFDMSENAVLPLLYQSNDLNGMLASVSSASPNDPFPTHYKNYEDAVASFQGDSSYLGDQLKGTMEAQVVLSERNSTDVLLKPNTSTDNLIAKTPYLGVCDGELSSFDLLEQQLVSSVRAQDVADACFTNENVFATCKLPVQDSTLVPLCSTDGGSFQGKLQYSNQSSVVTDVEFSSSSHALHGHSENIEPVDMSEEILKFSSMDDLCHWFGPSSEDSICKAVMTLDNTFSESREFNPTSFDLVGSSTLNDVLLTGLAVYNSNSDGNETSVVMHNAEKGTLDVMETDFSYDQADEWWRNTLTPVVSGVTDTGFSECISQLNSDTLPGTRKRLFSQLGIEELLRSGANYNPINSSVFECWLSPNKRQTVESSSVNGSTIHFTNLDRSGTRSDLMQPLCDLGSTNNLPSKKDTFSKLQATTLVDDSHSINVGKAVPQHPQKPEEQAKPTNKRARPGESTRPRPKDRQQIQDCIKELRGIIPNGGKCSIDSLLDRTIRYMLFLQSVLKYTDKLQEPSEPKLIEQENEVVLKDSGVADSKNCGITWAYEVGHETMLCPIIVEDMSPPGQMLIEMLCEVQGIFLEIIDIIRGFGLNILKAKMERKKNKLWARFIVEANRHVTRIDVFWSLVHLLQQTNTSGIDSSNKHWDALHANSLRS* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0835 754 MobiDBLite consensus disorder prediction 525 566 - -
Pvu1g0835 754 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 564 607 IPR036638 GO:0046983
Pvu1g0835 754 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 3 91 IPR025610 -
Pvu1g0835 754 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 746 IPR043561 GO:0003700|GO:0006355
Pvu1g0835 754 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 551 600 IPR011598 GO:0046983
Pvu1g0835 754 MobiDBLite consensus disorder prediction 542 566 - -
Pvu1g0835 754 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN-RELATED 1 746 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0835 Pvu-Chr1 13271731 13276761 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0835 4 95 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 32.979 1.26e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0835 - - vun:114190585 1266.52