Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0829 ATGGCAACAACCAGAAGATATGAGTTTGGAATGAACGAGGCTAGCCATCCAGACTCAATGAGAGCCACCATGGCTGAATTCTTCTCCACTTGCATCTTTGTCTTTGTTGGAGAAGGCTCAGTCCTTGCTTTGA 133 0.4586 MATTRRYEFGMNEASHPDSMRATMAEFFSTCIFVFVGEGSVLAL 44
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0829 44 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 4 44 - -
Pvu1g0829 44 SUPERFAMILY Aquaporin-like 12 43 IPR023271 -
Pvu1g0829 44 PANTHER AQUAPORIN-8 4 44 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0829 Pvu-Chr1 13102862 13103058 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0829 1 44 Major Intrinsic Protein MIP AT1G17810 61.702 5.07e-14 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0829 K09873 - pvu:PHAVU_001G0803000 91.6633