Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0799 ATGTCTGTGGATCTAAAGAAATCTAACAAGATCAGAGAAATTGTTAGACTTCAACAGATCCTCAAGAAATGGAGAAGGCTAGCTAATTCTTCAAAAACCACTGGTACCACCAATGTGGGCACTTCCACAACCACCAGCAAGAGTATAAAGTTTCTGAAGAGAACCCTTTCCCTATCAGAACGTGAGGGAGGTTCAAGCAATGTTGTTCCAAAAGGGTACCTAGCTGTTTGTGTTGGTGAAGAGCTTAAGAGGTTCACTATACCAACTGAGTACTTGGGTCACCAAGCCTTTCAGATTCTTCTGAGAGAAGCAGAAGAAGAATTTGGATTTCAACAAACAGGTGTTCTCAGGATTCCTTGTGAAGTGGCTGTTTTTCAGAGTATCTTGAAGATGGTGGAAAGGAAAGGGGACATGTCTCCCTCCCAAGATTGTAGACTCAGCATTGAAGAGATGTTGATGGGGTACTGCTCAGAAAACCAGCTTGCATATTCTCACCATCCTCAAAGTCCATTGTGCAGATAA 522 0.4253 MSVDLKKSNKIREIVRLQQILKKWRRLANSSKTTGTTNVGTSTTTSKSIKFLKRTLSLSEREGGSSNVVPKGYLAVCVGEELKRFTIPTEYLGHQAFQILLREAEEEFGFQQTGVLRIPCEVAVFQSILKMVERKGDMSPSQDCRLSIEEMLMGYCSENQLAYSHHPQSPLCR* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0799 173 Pfam Auxin responsive protein 23 132 IPR003676 GO:0009733
Pvu1g0799 173 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 173 IPR003676 GO:0009733
Pvu1g0799 173 PANTHER SAUR FAMILY PROTEIN 7 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0799 Pvu-Chr1 11465367 11466138 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0799 3 173 Calmodulin-binding Proteins AT2G24400 54.098 5.50e-57 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0799 K14488 - gmx:100799598 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1064 9 15660726 15661205 Pvu1g0799 1 11465367 11466138 PCT