Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0795 AAGAGAAGAAGGAGCAGGCAGTGGGAGAAGGAGGCAGTGGACAGTGAAGAAGGAGAAGGAAGTGGGTGTGCAAGTGAAGAACGAAATGAAAAAGCGCAAGTGAAGATGAGGACGAAGAATTCTAATAGAGAGTCTGCAAGAAGGTCCAGAAGAAGAAAACAAGCCCATTTGGCTGACTTGGAGTGGCAAGTTGAACGGCTGAGGCAGGAAAATTCACACTTATTCAACCAGCTTAACGATGCAAGCCAACAATTCCGTGATGCTGATACCAATAATCGAGTGCTAAAATCAGATGTTGAAGCTTTAAGAGCTAAGGTAAAGTTAGCTGAGGAAATGGTGAGAAGGGGTACAATCACCCCTTTCAACAACCAGATTCTTCCAAGCCAGACTCAATTAAGCACCGTTTCAGTTCTCAACACCAATAATAATAATCTTCGTCGCATGGCACATGTCTCACCAACCATCACTGTGCATGGGAATGATGGTGCTTCATATGGTGGTGGAATCAGTGTTAGTGGAGAAACCTCATCACCCCTTCTGCTTGGAAACTTGGATATAGCTTCCAGTGATTTCAATAGTGATAATGGTGTGAGCTCTATAACTAGCATGTGGGCTTAA 618 0.4401 KRRRSRQWEKEAVDSEEGEGSGCASEERNEKAQVKMRTKNSNRESARRSRRRKQAHLADLEWQVERLRQENSHLFNQLNDASQQFRDADTNNRVLKSDVEALRAKVKLAEEMVRRGTITPFNNQILPSQTQLSTVSVLNTNNNNLRRMAHVSPTITVHGNDGASYGGGISVSGETSSPLLLGNLDIASSDFNSDNGVSSITSMWA* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0795 205 CDD bZIP_plant_GBF1 48 86 IPR045314 GO:0003700|GO:0006355
Pvu1g0795 205 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 32 95 IPR004827 GO:0003700|GO:0006355
Pvu1g0795 205 SMART brlzneu 27 94 IPR004827 GO:0003700|GO:0006355
Pvu1g0795 205 Coils Coil 92 112 - -
Pvu1g0795 205 Coils Coil 50 84 - -
Pvu1g0795 205 MobiDBLite consensus disorder prediction 1 55 - -
Pvu1g0795 205 Pfam bZIP transcription factor 35 82 IPR004827 GO:0003700|GO:0006355
Pvu1g0795 205 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 37 52 IPR004827 GO:0003700|GO:0006355
Pvu1g0795 205 SUPERFAMILY Leucine zipper domain 35 84 IPR046347 GO:0003700|GO:0006355
Pvu1g0795 205 PANTHER BASIC LEUCINE ZIPPER 63 9 204 - -
Pvu1g0795 205 Gene3D - 27 89 - -
Pvu1g0795 205 PANTHER BASIC LEUCINE ZIPPER 9 9 204 - -
Pvu1g0795 205 MobiDBLite consensus disorder prediction 7 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0795 Pvu-Chr1 11306882 11310792 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0795 14 205 bZIP Transcription Factor Family AT5G24800 48.187 1.13e-43 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu1g0795 bZIP_1 2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0795 K25784 - pvu:PHAVU_001G0772001 370.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1067 9 15693125 15697967 Pvu1g0795 1 11306882 11310792 PCT