Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0792 ATGCCTGAACTTCGAAGCCGAAGAAACCGGGCAACGTTGCATGACCAAAACCCAAACCCAAACCCGTACCCGAACCCGAACTCAAAAACCCGCCAGAGAAGAACGAGAAGAACCACAGTCATCACCGGGAGGAACAATCGCAACACTCTCGCACGTTGTAGAATCGGTAACCGTGAATTAGAAGAGAAGGAGCAGCAACATCAACAACAACACGCGCCTCTGCTTAGGGTTTCGGAAGAAGATAAAGAGAAAGTGATGGATGACGAGTTCGACAGCGGCGGTGGCCGGAGCGCTGACAAGGCTGCGCCCGTCGAAGACGAAGGAAGCACTGCTCCCATTCCCGAGAGGGTACAGGTAGGTGGTTCTCCGTTGTACAAATTAGACAGAAAGCTTGGGAAGGGAGGGTTTGGACAGGTTTACGTAGGTCGACGAGTTGCGGCTGGTGCCGGAGCGTTAGAGGTAGCTTTGAAGTTTGAACATAGAAGCAGTAAGGGATGCAATTATGGACCTCCATATGAGTGGCAAGTTTACAATTCATTGGGTGGTAGTCATGGTGTTCCACGTGTTCATTACAAGGGACGGCAAGGTGATTACTATGTTATGGTCATGGATATGCTTGGCCCTAGTCTGTGGGATGTCTGGAATAACAACTCAAACACAATGTCTGCGGAAATGGTGGCATGTATAGCAATTGAGGCCATCTCCATATTAGAGAAGATGCATTCTAAAGGATATGTGCACGGTGATGTAAAACCTGAGAATTTTTTGCTTGGCACCCCGGGAACTGCTGACGAGAAAAAGCTTTTCCTGGTTGATCTTGGGTTAGCAACCCGTTGGCGGGATAGTTCAACTGGCCTTCATGTTGAGTATGATCAACGTCCTGACGTATTTAGGGGAACAGTTCGTTATGCTAGTGTGCATGCTCATCTTGGTAGAACAGGAAGCAGGAGAGATGATTTGGAATCTCTTGCTTACACATTAGTTTTCCTTCTTCGTGGCCGGCTACCTTGGCAAGGATACCAGGGAGAAAACAAAGGATTTCTTGTCTGCAAGAAAAAGATGGCAACCTCACCAGAAGCTTTGTGTTGTGTCTGTCCTCCACCTTTCAGGCAGTTTGTGGAGTACGTAGTGAATTTGAAGTTTGATGAAGAACCAAATTATGCAAAGTATATATCACTTTTTGATGGAATTGTTGGACCAAATCCTGACTTCAGACCCATAAATACTGACGGTGCACAAAAGCTTATATATCTGGTTGGACATAAGAGGGGACGGTTAACTGTGGAAGAAGATGATGATGAACAACCAAAGAAGAGAGTCAGAATGGGAATGCCAGCAATGCAATGGATTAGTGTGTACAATGCCCGCCGACCAATGAAGCAAAGGTACCATTACAATGTTGCTGATGTGCGGCTGTCCCAACACATTGAAAAGGGGTATGAGGATGGGTTATTTATCAGCAGCGTAGCTTGTTGTTCTAACCTCTGGGCACTTATTATGGATGCTGGCACTGGTTTCACTGCTCAAGTTCATGAACTCTCACCCCACTTTCTTCATAAGGAATGGATTATGGAACAGTGGGAAAATAGTTATTACATTAGTGCAATAGCAGGATCTAATAATGGGAGCTCATTCGTTGTAATGTCTAAAGGGACCCAATACTTGCAACAATCCTATAAAGTCAGTGAGTCATTTCCATTTAAGTGGATCAATAAAAAATGGAGAGAAGGGTTTTCTGTCACTGCTATGGCCACTTCTGGGAGTAAATGGGCAATTGTAATGTCCCGTGGTGCTGGATATTCGGACCAGGTTGTGGAGCTTGATTTCCTATATCCTAGTGAAGGCATTCATCGCAGGTGGGACAATGGTTACCGCATCACTTCAACTGCTGCTACATGGGACCAATCTGCTTTTGTTCTTAGTGTCCCAAGAAGAAAACCAGCTGATGAAACTCAAGAGACACTCCGCACATCTGCCTTTCCAAGTAGTCATGTAAAGGAAAAATGGTCAAAAAATCTCTATATTGCATCAATGTGCTATGGGAGAACAGTTTCATGA 2058 0.4534 MPELRSRRNRATLHDQNPNPNPYPNPNSKTRQRRTRRTTVITGRNNRNTLARCRIGNRELEEKEQQHQQQHAPLLRVSEEDKEKVMDDEFDSGGGRSADKAAPVEDEGSTAPIPERVQVGGSPLYKLDRKLGKGGFGQVYVGRRVAAGAGALEVALKFEHRSSKGCNYGPPYEWQVYNSLGGSHGVPRVHYKGRQGDYYVMVMDMLGPSLWDVWNNNSNTMSAEMVACIAIEAISILEKMHSKGYVHGDVKPENFLLGTPGTADEKKLFLVDLGLATRWRDSSTGLHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLVFLLRGRLPWQGYQGENKGFLVCKKKMATSPEALCCVCPPPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDFRPINTDGAQKLIYLVGHKRGRLTVEEDDDEQPKKRVRMGMPAMQWISVYNARRPMKQRYHYNVADVRLSQHIEKGYEDGLFISSVACCSNLWALIMDAGTGFTAQVHELSPHFLHKEWIMEQWENSYYISAIAGSNNGSSFVVMSKGTQYLQQSYKVSESFPFKWINKKWREGFSVTAMATSGSKWAIVMSRGAGYSDQVVELDFLYPSEGIHRRWDNGYRITSTAATWDQSAFVLSVPRRKPADETQETLRTSAFPSSHVKEKWSKNLYIASMCYGRTVS* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0792 685 SMART serkin_6 125 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0792 685 ProSitePatterns Protein kinases ATP-binding region signature. 131 157 IPR017441 GO:0005524
Pvu1g0792 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672|GO:0006468
Pvu1g0792 685 Gene3D Transferase(Phosphotransferase) domain 1 100 413 - -
Pvu1g0792 685 ProSiteProfiles Protein kinase domain profile. 125 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0792 685 MobiDBLite consensus disorder prediction 54 103 - -
Pvu1g0792 685 SUPERFAMILY Protein kinase-like (PK-like) 125 401 IPR011009 -
Pvu1g0792 685 Pfam Protein kinase domain 125 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0792 685 CDD STKc_CK1 125 394 - -
Pvu1g0792 685 PANTHER - 88 659 - -
Pvu1g0792 685 MobiDBLite consensus disorder prediction 1 117 - -
Pvu1g0792 685 PANTHER CASEIN KINASE-RELATED 88 659 - -
Pvu1g0792 685 Coils Coil 50 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0792 Pvu-Chr1 11149590 11156145 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0792 124 280 EF-hand Containing Proteins AT2G17290 31.288 2.08e-09 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Pvu1g0792 Pkinase 1.5e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0792 - - rcu:8275677 1130.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1141 9 16704229 16709140 Pvu1g0792 1 11149590 11156145 PCT