Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0785 ATGCTAAATTTTCAAAATCTCTTTCTTCTATTGACGGTGTTGTTTCTGCTATGGAAGCCTGCCATATGCAAAAGTGGGTGCAGGGAAAAGTGTGGCCGCGTTCACATTCAATTCCCATTTTACCTCAGAAATAGCGTGTTGAATCACACCACGGGCTATCCTCGTGGGTTCGGTCTGTTGTGTACGGATGCAGATGAGACTGTGCTGGATCTACCTTCTGTTCCAATAAAATTGTTTGTAAAAAACATAGATTACAAGTCACAGCAGATCCAACTCTACGACCCTCAAAATTGCTTTCCCAGGGAACTCATAAAGCTCGGCAATTCCTCTATTTCTCCATTTAAATTCCAATCATTTCAAGATCGGAATGTTTCCTTCTTCCGCTGCAACTCAATGTCATGCCCAATTTTGCAACTTGGATCTGAAAGTGACTTTCTTGATTCTGAGATAATATCTTGCACAAAGTTGAGTGATGTTTACTCCGTCCAGTGGTCTGTAAACGATGAGTTCAAGAACATCGTGGTTGCGGAATGGACCAACCCCAATTGCAGTTCCTGCGCAGCAAAAGGAAGTAAATGTAAATACAAGAATGGCACCCAAACTGAAATTGAATGTTTCGTTTGCCCCTCAAACGGGCTTCCAACATCAACTATTATACTTATTGCTGCAGGGGGAATAGGTGGTTTCATTCTTGTGCTGCTACTGGCCAAGGTTTTGTTTCATGTGTATGAGCATTATAAGATGAAAGGAGAAGACCAAGCTCGGATAGAGAAATTCTTGGAGGATTACAGGGCAATGAAGCCTACCAGATTCACTTACGCTGACATTAAGAGAATCACAAATGGGTTTAGTGAGAGTTTAGGAGAAGGAGCTCATGGAGCAGTGTTCAAGGGAATACTCTCCCGTGATATTCTCGTTGCTGTGAAGATACTCAACGACGCAGTTGGAGATGGAAAGGATTTCACAAACGAAGTGGGAACCATGGGCAAAATTCATCATGTTAATGTTGTTCGCTTGCTTGGATTCTGTGCAGATGGATTCCACCGTGCTCTTGTCTATGATTTCTTCCCAAATGGGTCACTGCAGAGATTTTTGGTTCCACCCGACAACAAGGATGTTTTCCTTGGTTGGGAGAAGTTGCAACAAATTGCTCTTGGTGTTGCCAAAGGGATTGAGTATCTCCATCTGGGCTGTGATCATAGAATACTTCACTTTGACATCAATCCTCACAATGTTTTAATAGATGACCACTTCAATCCAAAGATCACTGATTTTGGACTTGCTAAATTGTGTCCTAAAAATCAAAGTACTGTGTCTGTGACTGCAGCCAGGGGAACCTTAGGCTACATTGCCCCTGAAGTTTTCTCAAGAAACTTTGGCAATGTATCTTATAAGTCTGACATTTACAGTTATGGAATGTTGCTCCTGGAGATGGTGGGAGGAAGAAAGAATACAAATATGTCAGTAGAGGAAAGTTTCCAAGTTCTGTACCCTGAGTGGATCCATAATTTGGTGGAAGCCCGAGATGTAGAAGTTACAATTGAGAAGGAAGAAGATGTTAAAGTTGCAAGGAAACTTGCCATTATAGGACTTTGGTGTATTCAGTGGAACCCAGTGGATCGTCCATCCATGAAAATTGTGGTACAGATGCTTGAAGGAGATGGAGAGAAGTTAATTGCACCCCCTACTCCTTTTGATAAGACCGGTTCTTCGAAAACAAATGCAGTTGTTCCAACAAGACACCAGAATTTCGAGTTGGAAATTATTCATGAAATGGAAGAGTAA 1785 0.4185 MLNFQNLFLLLTVLFLLWKPAICKSGCREKCGRVHIQFPFYLRNSVLNHTTGYPRGFGLLCTDADETVLDLPSVPIKLFVKNIDYKSQQIQLYDPQNCFPRELIKLGNSSISPFKFQSFQDRNVSFFRCNSMSCPILQLGSESDFLDSEIISCTKLSDVYSVQWSVNDEFKNIVVAEWTNPNCSSCAAKGSKCKYKNGTQTEIECFVCPSNGLPTSTIILIAAGGIGGFILVLLLAKVLFHVYEHYKMKGEDQARIEKFLEDYRAMKPTRFTYADIKRITNGFSESLGEGAHGAVFKGILSRDILVAVKILNDAVGDGKDFTNEVGTMGKIHHVNVVRLLGFCADGFHRALVYDFFPNGSLQRFLVPPDNKDVFLGWEKLQQIALGVAKGIEYLHLGCDHRILHFDINPHNVLIDDHFNPKITDFGLAKLCPKNQSTVSVTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNMSVEESFQVLYPEWIHNLVEARDVEVTIEKEEDVKVARKLAIIGLWCIQWNPVDRPSMKIVVQMLEGDGEKLIAPPTPFDKTGSSKTNAVVPTRHQNFELEIIHEMEE* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0785 594 ProSitePatterns Protein kinases ATP-binding region signature. 287 309 IPR017441 GO:0005524
Pvu1g0785 594 Pfam Protein kinase domain 285 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0785 594 ProSiteProfiles Protein kinase domain profile. 281 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0785 594 SUPERFAMILY Protein kinase-like (PK-like) 263 552 IPR011009 -
Pvu1g0785 594 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 38 593 - -
Pvu1g0785 594 Gene3D Transferase(Phosphotransferase) domain 1 356 559 - -
Pvu1g0785 594 Pfam Wall-associated receptor kinase galacturonan-binding 27 94 IPR025287 GO:0030247
Pvu1g0785 594 PANTHER RUST RESISTANCE KINASE LR10-RELATED 38 593 IPR045874 GO:0004672
Pvu1g0785 594 Gene3D Phosphorylase Kinase; domain 1 255 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0785 Pvu-Chr1 10867622 10869729 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0785 180 564 Receptor kinase-like Gene Family AT1G66910 41.032 1.58e-101 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pvu1g0785 Pkinase 3.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0785 - - gmx:100819302 992.645