Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0781 ATGCCTCGCTATTTCTTGCACTCTGGTAATTTCAGTAACGAGTTACTGGGTCCTGGAAGGGATCCGCTAAAATTGGACCCATTTTTTCAACCGTCAATAGCTTATTTCAGCTGTAGCGATCCAATCACTGATGATCCTAGATATGTTGCCGTGGAAGGCAGAGGTTGTGAGCACAGAGAACACGTGTATGCTGTAGTTAGGGATTCGCTATATGGTTTTGGTGTGAAGGACATCAAGGTTGGGTGCCAGCTGAAGGTGGCTACTTTCGCCACTGCGCGTGACCACAAGAAGTTCAACCAAGCAGTTTCCTATGGTGAAATCTACAAAATGCTCTCTCAGGGATTTGAGCTCTCTTGGTTGTATGTTATTTGTGAAGATCGATGCGGAAAGGGAAGAGATTGCAGTGTTGTGGATGAATCCACTGATGAAGTCCGATGTGACCCGCAAAATTGCCAATATCTCTACGAACAACCTAACACAGTCACATACAAGTGCAGCAGCGGCGGTGGTACTGCAGAAAACATAATTTCCGCTATAAGTTTATTTTGCATTGGTCTTTACAGAGGATTTATGCAAAATTTTGGCTTGAATAAAGCTACAGGATATGACGATGAAAACATAGCTGAAATAGGAAAAAGTGTTGGAAGGTACATTCTACCATACTTTATAATACGGTTTCTATTTGGTGTGATAGCTTTTGTTGTGTTGTTGATGTATAAATGGGGAATAAGACATAAATCAAAGTATGAAAATATTGAAGCTTTTCTACAAGAAAACACCCTCATGCCAATAAGATACTCATATAAAGAAATAAAGCACATGAGTAGGGGTTTTAAGGAAAAGCTAGGCCAAGGAGGATTTGGCTTGGTATACAAAGGAAAGTTGCGTAGTGGGTCATTTGTTGCGATAAAGATGTTGAGTAAATCAAACTTTAATGGGCAAGATTTCATCAATGAAGTTGGTACTATTGGAACAATACATCATATAAATGTGGTGCGACTTATTGGATTTTGTGTTGAATCATCAAATCGCGCTCTTGTTTATGAATTCATGCCTAATGGTTCTCTTGATAAATATATCTTTTCCAAACAAGATAGTGTCTCTTTAACTCAGAGACAAATATATGAGATATCTATTGGAGTGGCTCGTGAAATTGCTTATTTGCATGAAGGTTGTGACATGCAAATTTTGCATTTTGATATCAAGCCACATAACATCCTTCTGGACGAAAACTTTATCCCAAAGGTTTCAGACTTTGGCTTGGCAAGGCTTTATCCCATAGACAAAAGTATTATCACTTTGACTGATGCAAGGGGAACACTTGGATACATGGCCCCTGAGTTATTTTATCATAATATGGGGAGAGTATCACACAAATCAGATGTTTATAGTTTTGGAATGCTTTTGATGGAAATGGCAAATAAAAAAAGAAATTTTAATCCACATGCAGATGATTCAATTGAACTTTTTTTTCCTTTTTGGATATACAATGAATTGAGTGGAGAAAATGAGATAGAAGGGGAAATTGTTAGCAAGCAGGAATACAATAATGAGGTAAAGAAGATGTTTTTAGTAGCATTATGGTGTATACAATCGAAACCAAGTGATCGTCCTCCAATGAACAAAGTAGTAGAGATGTTGGAAGGAGAACTTGAGAACATTGAAATGCCTCCAAAACCTTTCCTATACCAGGTAAATGATCATAATATTAAATCTTACCAAACCCTTTCAAATGATTCTAGTGAATCAACAAGTTATCCTACTGGGTAA 1770 0.3763 MPRYFLHSGNFSNELLGPGRDPLKLDPFFQPSIAYFSCSDPITDDPRYVAVEGRGCEHREHVYAVVRDSLYGFGVKDIKVGCQLKVATFATARDHKKFNQAVSYGEIYKMLSQGFELSWLYVICEDRCGKGRDCSVVDESTDEVRCDPQNCQYLYEQPNTVTYKCSSGGGTAENIISAISLFCIGLYRGFMQNFGLNKATGYDDENIAEIGKSVGRYILPYFIIRFLFGVIAFVVLLMYKWGIRHKSKYENIEAFLQENTLMPIRYSYKEIKHMSRGFKEKLGQGGFGLVYKGKLRSGSFVAIKMLSKSNFNGQDFINEVGTIGTIHHINVVRLIGFCVESSNRALVYEFMPNGSLDKYIFSKQDSVSLTQRQIYEISIGVAREIAYLHEGCDMQILHFDIKPHNILLDENFIPKVSDFGLARLYPIDKSIITLTDARGTLGYMAPELFYHNMGRVSHKSDVYSFGMLLMEMANKKRNFNPHADDSIELFFPFWIYNELSGENEIEGEIVSKQEYNNEVKKMFLVALWCIQSKPSDRPPMNKVVEMLEGELENIEMPPKPFLYQVNDHNIKSYQTLSNDSSESTSYPTG* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0781 589 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 569 IPR045874 GO:0004672
Pvu1g0781 589 SMART serkin_6 276 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0781 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 396 408 IPR008271 GO:0004672|GO:0006468
Pvu1g0781 589 Pfam Protein kinase domain 279 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0781 589 Gene3D Phosphorylase Kinase; domain 1 250 350 - -
Pvu1g0781 589 SUPERFAMILY Protein kinase-like (PK-like) 261 548 IPR011009 -
Pvu1g0781 589 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 1 569 - -
Pvu1g0781 589 ProSiteProfiles Protein kinase domain profile. 276 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0781 589 CDD STKc_IRAK 282 549 - -
Pvu1g0781 589 ProSitePatterns Protein kinases ATP-binding region signature. 282 304 IPR017441 GO:0005524
Pvu1g0781 589 Gene3D Transferase(Phosphotransferase) domain 1 351 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0781 Pvu-Chr1 10585958 10593506 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0781 222 588 Receptor kinase-like Gene Family AT4G18250 47.480 5.70e-106 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pvu1g0781 Pkinase 3.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0781 - - pvu:PHAVU_001G075800g 1210.28