Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu1g0779 | ATGAAAAACGGTGTGCGTAGAGAGAGCGCGTTATTATTGATGCTGGTGTTTCTACTTGAGCAAATTGGTGCTACAAAACAGTATGAACATGCGTGTCTCCCTTCTTCGTGTGGCAGAGTCACCAACATAACGCATCCATTCCGATTAAAAGGCGACCCAGATCACTGCGGCGACAACAGGTATGAGCTCACCTGTGAAAATAATGTTGCCATTTTATATCTGTACTCCGGAAAATATCATGTTCAGGCAATCAACTACAACAATTTCACAATTCGACTGGTGGATCCCGGCGTTCAACAATTAAATTGCTCCTCCATTCCTCGCTATTTCTTGTCTCGATCCAATTTCAGCGATTCCTATGATTTGAGCAACATAGATATGGAAGCATACCATACTAGTCAAAAACGATTATCCGATCAACCTGTCTATTTTAATCATGGGAAGGTGAACGTGGTTGGTTCAGAGCCGGTTTCCGAACATGTAGTTTTCATGAATTGTAGGCATCCAGTGAGTGACAATGGTAAGTATGTAGATACTGCAGCCTGCGTGAATTGGCACTCCAAAGGTTATACATATGCTATCGCTGGTGACTTAATCTCAGAGGATTTAGAGGTTGGTTGTGATGTAAAGCTGGTTACTCCCACATCTTGGTGGGGTTTGAATACAACTCAACATTCCTACACAGAGATGTACAAGGCACTAGTGTATGGGTTTGAGATTTCGTGGATGATTCGCGCCTGCGAGGACATTTGTGGAAAGTCAGTGGCTCGCTACTGCAATTGGAACCTTTCCGGGAAGGTCGATTGCTCGCTCAACTGCCACAGTTTCCTTGGAATTTTGCATATATGCGATGGTAGTGGGATATGGTACCAGGTTCTACTATACGCAAGAGATACTCTTTATGCTGTCTGGATAGGTCTGGTTCAAACAATAAAAGGACAAAATGAAGGTTTTGATGATGTCGGCAACTATAAATTAGGATTAATTATAGGACACTACGTTTTACCATCCTTCTGGGCAGGAAGATTTTTGTTTGGGATGACTTTATTTATTGCACTGTTGATATACAAATGGAAAAGTCGACATTTGTCTATGTACGAAAGTATTGAAAATTACTTGCAACATGCCAATTTGATGCCTATTAGATATTCATATAAGGAAATCAAGAAAATGACCGAAGGTTTCAATGACAAGTTGGGTGAAGGAGGATATGGATCTGTGTTTAAGGGAAAGTTGTCTAGTGGACCTGTTGCGGCAATAAAAATGTTAGGTAAATCAACACGAGATGGACAAGATTTTATCAGTGAAGTTGCAACTATTGGAAGAATACATCATCAAAATATAGTCAAATTAGTTGGATTTTGTGCCGAAGGATCAAAACGTGCACTTGTGTACGAATTCATGTCAAATGGATCTCTTGATAAAATTATTTTTTCTAAAGATGGAAATATAGATTTAAGCTATGATGAAATATATAATATTTCAATTGGAGTAGCTCGGGGAATTGCTTATCTTCACCATGGGTGTGAGATGCAAATTTTGCATTTTGATATCAAGCCCCACAACATCCTACTAGATGGAAAACTCACCCCAAAGGTATCTGATTTTGGATTGGCAAAGTTATATCCAATAGATAACAACATTGCCACAATGACAGGAGCAAGAGGAACAATTAGGTATATGGCTCCAGAATTATTTTATAAAAATATTGGAAGAATATCTCACAAGGCTGATGTTTATAGCTTTGGAATGCTTCTGATGGAGATGGCAAACAAAGGAAAAAACCTAAATCCCCATGCAGAGCATTCAAGTCAACTATACTTTCCCTTTTGGATTCATAAGCATGTAGAAAAAGAAAAACATATAGAAATTGAAGATGCCAACGAGAAAGAAAAGGAAGAAGTAAAAAAAATGATTATAGTTGCACTTTGGTGTATACAGTTGAATCCAAATGATCGTCCCACAATGAATGAAGTAGTTGAAATGCTTGAAGGAGACATTGAAAACCTGAAAATACCTCCAAAGCCTACTTTATATCCAGATGAAACAATGTCAAGTGACCTAGGCTTCACTAGTTCTTCCAATTCTTCCATGTAA | 2097 | 0.3858 | MKNGVRRESALLLMLVFLLEQIGATKQYEHACLPSSCGRVTNITHPFRLKGDPDHCGDNRYELTCENNVAILYLYSGKYHVQAINYNNFTIRLVDPGVQQLNCSSIPRYFLSRSNFSDSYDLSNIDMEAYHTSQKRLSDQPVYFNHGKVNVVGSEPVSEHVVFMNCRHPVSDNGKYVDTAACVNWHSKGYTYAIAGDLISEDLEVGCDVKLVTPTSWWGLNTTQHSYTEMYKALVYGFEISWMIRACEDICGKSVARYCNWNLSGKVDCSLNCHSFLGILHICDGSGIWYQVLLYARDTLYAVWIGLVQTIKGQNEGFDDVGNYKLGLIIGHYVLPSFWAGRFLFGMTLFIALLIYKWKSRHLSMYESIENYLQHANLMPIRYSYKEIKKMTEGFNDKLGEGGYGSVFKGKLSSGPVAAIKMLGKSTRDGQDFISEVATIGRIHHQNIVKLVGFCAEGSKRALVYEFMSNGSLDKIIFSKDGNIDLSYDEIYNISIGVARGIAYLHHGCEMQILHFDIKPHNILLDGKLTPKVSDFGLAKLYPIDNNIATMTGARGTIRYMAPELFYKNIGRISHKADVYSFGMLLMEMANKGKNLNPHAEHSSQLYFPFWIHKHVEKEKHIEIEDANEKEKEEVKKMIIVALWCIQLNPNDRPTMNEVVEMLEGDIENLKIPPKPTLYPDETMSSDLGFTSSSNSSM* | 699 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu1g0779 | 698 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 11 | 689 | IPR045874 | GO:0004672 | |
Pvu1g0779 | 698 | Pfam | Protein kinase domain | 397 | 661 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu1g0779 | 698 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 513 | 525 | IPR008271 | GO:0004672|GO:0006468 | |
Pvu1g0779 | 698 | Pfam | Wall-associated receptor kinase galacturonan-binding | 32 | 95 | IPR025287 | GO:0030247 | |
Pvu1g0779 | 698 | SMART | serkin_6 | 393 | 663 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu1g0779 | 698 | SUPERFAMILY | Protein kinase-like (PK-like) | 378 | 664 | IPR011009 | - | |
Pvu1g0779 | 698 | MobiDBLite | consensus disorder prediction | 684 | 698 | - | - | |
Pvu1g0779 | 698 | Gene3D | Phosphorylase Kinase; domain 1 | 367 | 467 | - | - | |
Pvu1g0779 | 698 | Gene3D | Transferase(Phosphotransferase) domain 1 | 468 | 672 | - | - | |
Pvu1g0779 | 698 | ProSitePatterns | Protein kinases ATP-binding region signature. | 399 | 421 | IPR017441 | GO:0005524 | |
Pvu1g0779 | 698 | ProSiteProfiles | Protein kinase domain profile. | 393 | 678 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu1g0779 | 698 | PANTHER | STRESS-INDUCED RECEPTOR-LIKE KINASE | 11 | 689 | - | - | |
Pvu1g0779 | 698 | MobiDBLite | consensus disorder prediction | 674 | 698 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu1g0779 | Pvu-Chr1 | 10561957 | 10565192 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu1g0779 | 10 | 696 | Receptor kinase-like Gene Family | AT5G38260 | 32.199 | 2.21e-103 | 327 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Pvu1g0779 | Pkinase | 3.4e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu1g0779 | - | - | gmx:100305367 | 887.871 |