Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0779 ATGAAAAACGGTGTGCGTAGAGAGAGCGCGTTATTATTGATGCTGGTGTTTCTACTTGAGCAAATTGGTGCTACAAAACAGTATGAACATGCGTGTCTCCCTTCTTCGTGTGGCAGAGTCACCAACATAACGCATCCATTCCGATTAAAAGGCGACCCAGATCACTGCGGCGACAACAGGTATGAGCTCACCTGTGAAAATAATGTTGCCATTTTATATCTGTACTCCGGAAAATATCATGTTCAGGCAATCAACTACAACAATTTCACAATTCGACTGGTGGATCCCGGCGTTCAACAATTAAATTGCTCCTCCATTCCTCGCTATTTCTTGTCTCGATCCAATTTCAGCGATTCCTATGATTTGAGCAACATAGATATGGAAGCATACCATACTAGTCAAAAACGATTATCCGATCAACCTGTCTATTTTAATCATGGGAAGGTGAACGTGGTTGGTTCAGAGCCGGTTTCCGAACATGTAGTTTTCATGAATTGTAGGCATCCAGTGAGTGACAATGGTAAGTATGTAGATACTGCAGCCTGCGTGAATTGGCACTCCAAAGGTTATACATATGCTATCGCTGGTGACTTAATCTCAGAGGATTTAGAGGTTGGTTGTGATGTAAAGCTGGTTACTCCCACATCTTGGTGGGGTTTGAATACAACTCAACATTCCTACACAGAGATGTACAAGGCACTAGTGTATGGGTTTGAGATTTCGTGGATGATTCGCGCCTGCGAGGACATTTGTGGAAAGTCAGTGGCTCGCTACTGCAATTGGAACCTTTCCGGGAAGGTCGATTGCTCGCTCAACTGCCACAGTTTCCTTGGAATTTTGCATATATGCGATGGTAGTGGGATATGGTACCAGGTTCTACTATACGCAAGAGATACTCTTTATGCTGTCTGGATAGGTCTGGTTCAAACAATAAAAGGACAAAATGAAGGTTTTGATGATGTCGGCAACTATAAATTAGGATTAATTATAGGACACTACGTTTTACCATCCTTCTGGGCAGGAAGATTTTTGTTTGGGATGACTTTATTTATTGCACTGTTGATATACAAATGGAAAAGTCGACATTTGTCTATGTACGAAAGTATTGAAAATTACTTGCAACATGCCAATTTGATGCCTATTAGATATTCATATAAGGAAATCAAGAAAATGACCGAAGGTTTCAATGACAAGTTGGGTGAAGGAGGATATGGATCTGTGTTTAAGGGAAAGTTGTCTAGTGGACCTGTTGCGGCAATAAAAATGTTAGGTAAATCAACACGAGATGGACAAGATTTTATCAGTGAAGTTGCAACTATTGGAAGAATACATCATCAAAATATAGTCAAATTAGTTGGATTTTGTGCCGAAGGATCAAAACGTGCACTTGTGTACGAATTCATGTCAAATGGATCTCTTGATAAAATTATTTTTTCTAAAGATGGAAATATAGATTTAAGCTATGATGAAATATATAATATTTCAATTGGAGTAGCTCGGGGAATTGCTTATCTTCACCATGGGTGTGAGATGCAAATTTTGCATTTTGATATCAAGCCCCACAACATCCTACTAGATGGAAAACTCACCCCAAAGGTATCTGATTTTGGATTGGCAAAGTTATATCCAATAGATAACAACATTGCCACAATGACAGGAGCAAGAGGAACAATTAGGTATATGGCTCCAGAATTATTTTATAAAAATATTGGAAGAATATCTCACAAGGCTGATGTTTATAGCTTTGGAATGCTTCTGATGGAGATGGCAAACAAAGGAAAAAACCTAAATCCCCATGCAGAGCATTCAAGTCAACTATACTTTCCCTTTTGGATTCATAAGCATGTAGAAAAAGAAAAACATATAGAAATTGAAGATGCCAACGAGAAAGAAAAGGAAGAAGTAAAAAAAATGATTATAGTTGCACTTTGGTGTATACAGTTGAATCCAAATGATCGTCCCACAATGAATGAAGTAGTTGAAATGCTTGAAGGAGACATTGAAAACCTGAAAATACCTCCAAAGCCTACTTTATATCCAGATGAAACAATGTCAAGTGACCTAGGCTTCACTAGTTCTTCCAATTCTTCCATGTAA 2097 0.3858 MKNGVRRESALLLMLVFLLEQIGATKQYEHACLPSSCGRVTNITHPFRLKGDPDHCGDNRYELTCENNVAILYLYSGKYHVQAINYNNFTIRLVDPGVQQLNCSSIPRYFLSRSNFSDSYDLSNIDMEAYHTSQKRLSDQPVYFNHGKVNVVGSEPVSEHVVFMNCRHPVSDNGKYVDTAACVNWHSKGYTYAIAGDLISEDLEVGCDVKLVTPTSWWGLNTTQHSYTEMYKALVYGFEISWMIRACEDICGKSVARYCNWNLSGKVDCSLNCHSFLGILHICDGSGIWYQVLLYARDTLYAVWIGLVQTIKGQNEGFDDVGNYKLGLIIGHYVLPSFWAGRFLFGMTLFIALLIYKWKSRHLSMYESIENYLQHANLMPIRYSYKEIKKMTEGFNDKLGEGGYGSVFKGKLSSGPVAAIKMLGKSTRDGQDFISEVATIGRIHHQNIVKLVGFCAEGSKRALVYEFMSNGSLDKIIFSKDGNIDLSYDEIYNISIGVARGIAYLHHGCEMQILHFDIKPHNILLDGKLTPKVSDFGLAKLYPIDNNIATMTGARGTIRYMAPELFYKNIGRISHKADVYSFGMLLMEMANKGKNLNPHAEHSSQLYFPFWIHKHVEKEKHIEIEDANEKEKEEVKKMIIVALWCIQLNPNDRPTMNEVVEMLEGDIENLKIPPKPTLYPDETMSSDLGFTSSSNSSM* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0779 698 PANTHER RUST RESISTANCE KINASE LR10-RELATED 11 689 IPR045874 GO:0004672
Pvu1g0779 698 Pfam Protein kinase domain 397 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0779 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 513 525 IPR008271 GO:0004672|GO:0006468
Pvu1g0779 698 Pfam Wall-associated receptor kinase galacturonan-binding 32 95 IPR025287 GO:0030247
Pvu1g0779 698 SMART serkin_6 393 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0779 698 SUPERFAMILY Protein kinase-like (PK-like) 378 664 IPR011009 -
Pvu1g0779 698 MobiDBLite consensus disorder prediction 684 698 - -
Pvu1g0779 698 Gene3D Phosphorylase Kinase; domain 1 367 467 - -
Pvu1g0779 698 Gene3D Transferase(Phosphotransferase) domain 1 468 672 - -
Pvu1g0779 698 ProSitePatterns Protein kinases ATP-binding region signature. 399 421 IPR017441 GO:0005524
Pvu1g0779 698 ProSiteProfiles Protein kinase domain profile. 393 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu1g0779 698 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 11 689 - -
Pvu1g0779 698 MobiDBLite consensus disorder prediction 674 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0779 Pvu-Chr1 10561957 10565192 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0779 10 696 Receptor kinase-like Gene Family AT5G38260 32.199 2.21e-103 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pvu1g0779 Pkinase 3.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0779 - - gmx:100305367 887.871