Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0777 ATGAAGACGCCAAAACGCCACTCGCCGTCGGCAAACGCTGTCCGGCGAGTGGACCCTGATTCAGCTGAGTTTGTTGCGAGGTTCAACAACGGTCGCCAGAGAAGGCTCAAAATCAGGAAACTGAAGTACACTTGCCAGGCGAAGATCAGCATCAGAAATGGCAACGGCTCCGCGCCGCCGGCCGAGGGGCCGGAGGGAGGGAGCAGAGAGATTCATGAGGAGGTGGAGATATCGCTGTCGCTGGGGGCGGCGTCGTCGTCATCAGAGGAGGAGGAGCGTTCATCGTCGGAGCAAAACGACGGCGTTTTGTTGTACGGGTCAACGTCGGTGATTGGGAGGAGAAAGGAGATGGAGGACGCGGTGAGTACGGAGATAGGATTTGCTGCGAAGGAGAGAGGGATGTACGACTTCTTCGCGGTGTACGACGGCCACGGCGGAGCCCAGGTGGCGGAGGCGTGTCGGGAGCGATTGCACCAGCTGGTTGCGGAGGAGGTGGAGAGGAGGGAGAGTGAGGTGGAAGGGGACTGGCAGGGAGTGATGGAAGGGTGTTTCCGTAAAATGGACAGCGAGGTCGCCGATAATGCGGCCGTCAGGACTGTTGGTTCCACGGCGGTTGTAGCTGTCATAGCGGCGGAGGAGCTTGTCGTCGCTAATTGCGGTGATTGTAGGGCTGTGTTGGGAAGAGGAGGTGAGGCTGTGGACTTGTCTAGTGATCATAAGCCCAATAGACCCGACGAGTTGATGCGAATCGAAGAGGCTGGTGGAAGGGTGATTAACTGGAATGGCCAGCGCGTGCTTGGTGTTCTTGCTACTTCACGATCCATAGGAGATCAGTACCTTCGACCTTATGTAATATCAAAACCAGAAGTGACAGTGACAAAGCGAAGCAGCAAGGATGAATTTCTGATACTAGGAAGTGATGGATTGTGGGATGTGATTTCCAGTGAAGTTGCATGCCAAGTTGTAAGGAAATGCCTGAATGGACAGATTAGGAGAGTGTCCAATGAAGTTGGGAAGCATCAAAACCGTGCTGCCGAGGCTGCAAGCCTCTTAGCTGAGATAGCATTGGCAAAGGGAAGTAGAGATAACACCAGTGTCATTGTAGTTGAGCTAAGAGGAACAGTAACATAA 1131 0.542 MKTPKRHSPSANAVRRVDPDSAEFVARFNNGRQRRLKIRKLKYTCQAKISIRNGNGSAPPAEGPEGGSREIHEEVEISLSLGAASSSSEEEERSSSEQNDGVLLYGSTSVIGRRKEMEDAVSTEIGFAAKERGMYDFFAVYDGHGGAQVAEACRERLHQLVAEEVERRESEVEGDWQGVMEGCFRKMDSEVADNAAVRTVGSTAVVAVIAAEELVVANCGDCRAVLGRGGEAVDLSSDHKPNRPDELMRIEEAGGRVINWNGQRVLGVLATSRSIGDQYLRPYVISKPEVTVTKRSSKDEFLILGSDGLWDVISSEVACQVVRKCLNGQIRRVSNEVGKHQNRAAEAASLLAEIALAKGSRDNTSVIVVELRGTVT* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0777 376 ProSitePatterns PPM-type phosphatase domain signature. 137 145 IPR000222 GO:0043169
Pvu1g0777 376 CDD PP2Cc 105 371 IPR001932 -
Pvu1g0777 376 SUPERFAMILY PP2C-like 101 372 IPR036457 -
Pvu1g0777 376 MobiDBLite consensus disorder prediction 81 101 - -
Pvu1g0777 376 Gene3D - 97 374 IPR036457 -
Pvu1g0777 376 MobiDBLite consensus disorder prediction 1 21 - -
Pvu1g0777 376 Pfam Protein phosphatase 2C 105 364 IPR001932 -
Pvu1g0777 376 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 82 373 - -
Pvu1g0777 376 SMART PP2C_4 93 369 IPR001932 -
Pvu1g0777 376 PANTHER ALPHABET, ISOFORM E-RELATED 82 373 - -
Pvu1g0777 376 ProSiteProfiles PPM-type phosphatase domain profile. 104 371 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0777 Pvu-Chr1 10506529 10509049 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0777 105 372 PP2C-type Phosphatase Gene Family AT2G29380 52.797 4.71e-93 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0777 K14497 - gmx:100807235 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g0777 1 10506529 10509049 Pvu1g0777 1 10506529 10509049 ECH