Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0776 ATGGGGAGAAAAGGAAGCAGCTGGTTCTCGTCCGTGAAGAAAGTTTTCAAGTCTTCTTCTAAAGACTTGCCAGAGCCTGAGAAGAAGAAAGACAGCACACAGAAATTACAGCATGAAGTGGCAGAGGTGGTGTCTTTTGAGCATTTTCCAGTAGAGAGTTCTCCGGATAATAATCCGACAAATGAAGAGAGTGGCACTTCAACTCCAGTTACAGAAGATAGAAGCCACGCCATTGCCGTTGCAGCAGCTACTGCCGCAGCCGCTGAAGCTGCCGTGGCGGCTGCTCAAGCAGCTGCAAGAGTGGTGAGATTGGCAGGTTATGGACGCCAATCCAAGGAAGAAAGAGCAGCAGTACTCATTCAATCATACTACAGAGGCTATCTAGCTCGGCGTGCACTGCGAGCATTGAAGGGATTGGTGAGGCTGCAAGCACTGGTGAGGGGACACAATGTGAGAAAGCAAGCCCAAATGACTATGCGATGCATGCAAGCACTGGTGAGGGTGCAGGCCCGAGTAAGGGCTCGCCGACTCCAACTGAGTCACGTCAACGAGGAAAGACAACAATATCAGAAGATCGAAGAGCCCAAGCCCAAGCCCATGAGCCCCATGAGAAGGACGCACATCAATAATGATTGGGACAATAGGCGTCAAAGTAGCTACAAAATTAAGGAAAACGATTTGAGGAAACATGAAGCTACAATGAAGAGGGAGAGAGCTCTCGCTTACGCTTTCAACTACCAACAGCAACAGCAACAGCAGCAAAATCAATATTTGTTGGGTGAATGGAAGGGTAAGGATGAAATAGGAATAAAGGAAAAAGCGCAATGGGGTTGGAACTGGTTGGAGCGTTGGATGTCCTCACAACCAGACAATGTGAGGAACATGGGGCCACGTGAGACCTCTTACATGACTCATGCTTCTCCAACATCGACCACCACAGATAACATGTCTGAGAAGACCGTGGAAATGGATATGATTGCAACTCCAGGCCCAGCCAATGTCAGAAGCATAAGCCCCATAAACCCAGACTTTATTGATTCAAGCCCACTCTCCAATAGGCAGAATCATCATATACCTCCCAGCCCAAATAGACGTTATATGGCCCCAACTCAGTCTGCAAAGGCTAAGGTTCGGGCTCAAGGCCCATCGAAGCCTCGGGTTTCAGCTGGGCCTCAGTGGAACTCCTCAATGAAGGGAGGCTCAACCTGCGACTCGTCTAGTTCAGGTGGAGGAATCACCGCTTACCAAATTCCAAGAAGTCCAGGCCCAAAAATTAATGGCATTCGTTCACAGTCCAGAAGGGTTGTGGGTAGCAGTCCAGATTACATTGAGGATTGGGCCCTTCCTCTTGGAACCCATGGTTGGGCTTAG 1371 0.4923 MGRKGSSWFSSVKKVFKSSSKDLPEPEKKKDSTQKLQHEVAEVVSFEHFPVESSPDNNPTNEESGTSTPVTEDRSHAIAVAAATAAAAEAAVAAAQAAARVVRLAGYGRQSKEERAAVLIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRLQLSHVNEERQQYQKIEEPKPKPMSPMRRTHINNDWDNRRQSSYKIKENDLRKHEATMKRERALAYAFNYQQQQQQQQNQYLLGEWKGKDEIGIKEKAQWGWNWLERWMSSQPDNVRNMGPRETSYMTHASPTSTTTDNMSEKTVEMDMIATPGPANVRSISPINPDFIDSSPLSNRQNHHIPPSPNRRYMAPTQSAKAKVRAQGPSKPRVSAGPQWNSSMKGGSTCDSSSSGGGITAYQIPRSPGPKINGIRSQSRRVVGSSPDYIEDWALPLGTHGWA* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0776 456 MobiDBLite consensus disorder prediction 1 72 - -
Pvu1g0776 456 MobiDBLite consensus disorder prediction 185 201 - -
Pvu1g0776 456 Gene3D - 110 164 - -
Pvu1g0776 456 MobiDBLite consensus disorder prediction 51 72 - -
Pvu1g0776 456 PANTHER IQ-DOMAIN 5-RELATED 1 438 - -
Pvu1g0776 456 MobiDBLite consensus disorder prediction 387 414 - -
Pvu1g0776 456 MobiDBLite consensus disorder prediction 185 210 - -
Pvu1g0776 456 PANTHER IQ-DOMAIN 21 1 438 - -
Pvu1g0776 456 ProSiteProfiles IQ motif profile. 113 141 IPR000048 GO:0005515
Pvu1g0776 456 SMART iq_5 135 156 IPR000048 GO:0005515
Pvu1g0776 456 SMART iq_5 112 134 IPR000048 GO:0005515
Pvu1g0776 456 MobiDBLite consensus disorder prediction 345 359 - -
Pvu1g0776 456 ProSiteProfiles IQ motif profile. 137 164 IPR000048 GO:0005515
Pvu1g0776 456 MobiDBLite consensus disorder prediction 345 428 - -
Pvu1g0776 456 Pfam IQ calmodulin-binding motif 114 134 IPR000048 GO:0005515
Pvu1g0776 456 Pfam IQ calmodulin-binding motif 140 155 IPR000048 GO:0005515
Pvu1g0776 456 MobiDBLite consensus disorder prediction 18 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0776 Pvu-Chr1 10495702 10501018 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0776 1 424 IQD Protein Family AT3G49260 49.571 1.28e-99 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0776 - - gmx:100798026 637.876