Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0772 ATGTTCGCAGAGACAGAACTTCTGTTCCCATATTTTCGAAATTTCTCTCAAGAGTTTCAACAACTTGAGGAATACTGCATGACCCTAAAGTCCACTTCTTCAATGAATGACCTCATACAATCTTCTTCTGCAATCTCAGAATATGATTTGTTAATTGAGGGAGATCTGTTCAAAGCACCTGAACCTATTATTGAAGAACCAGAAATAGACCTCGATCCTGTGCAAGCAGCCATCTCAATGATATCTTGCGGGGAGGATGTCCCCTCACAGGGTCTAAAATCATCAGATATTAATTTACTTCAAAATGAACAGCTTCTGAGTGAGGTATTTTACGAGTGCAAAAAAGATCTCTTAGAAAAGACAGTGATAGAGTCACCACTGGCGGATATTATGGAAATCAAGGTTTCACCACTGAACATTGAGGATAATTCAATTCAAGTAAACGAACCACTTCCTCACATGACTCTACCAAAGAGTATCAGTTCAGAAAGTCTGAGTTCAATGGACTGGATGCATGGAGCTGCATTGAAGCCCAGTTTTCTGGATTTCCCGGGATTAGATTTCAATGCAGTTTATGGCATGCGGAGAGCATTTAGCGAAGGAGATATAAAGACTCTTAGTACTGGGAACACGAGCTTTGGCCAATCTCCCCAGGAGAAGCCTTTTCTTCTCGGCAACTGCACTAGTGAGGAACGTCAAGAAAAGCTCTCCAGGTATAGAAATAAGAAGACAAAGAGAAATTTTGGGAGGAAAATTAAGTATGCTTGCCGGAAAGCACTTGCTGACAGTCAACCAAGAATCCGTGGAAGATTTGCAAAGACAGAAGAGTTAGATTTCAAGAGGTAA 846 0.409 MFAETELLFPYFRNFSQEFQQLEEYCMTLKSTSSMNDLIQSSSAISEYDLLIEGDLFKAPEPIIEEPEIDLDPVQAAISMISCGEDVPSQGLKSSDINLLQNEQLLSEVFYECKKDLLEKTVIESPLADIMEIKVSPLNIEDNSIQVNEPLPHMTLPKSISSESLSSMDWMHGAALKPSFLDFPGLDFNAVYGMRRAFSEGDIKTLSTGNTSFGQSPQEKPFLLGNCTSEERQEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEELDFKR* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0772 281 ProSiteProfiles CCT domain profile. 232 274 IPR010402 GO:0005515
Pvu1g0772 281 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 27 279 - -
Pvu1g0772 281 Pfam CCT motif 232 274 IPR010402 GO:0005515
Pvu1g0772 281 PANTHER CCT MOTIF FAMILY PROTEIN 27 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g0772 Pvu-Chr1 10398673 10402411 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0772 228 278 C2C2-CO-like Transcription Factor Family AT5G57660 49.020 9.77e-10 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pvu1g0772 CCT 1.8e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0772 - - gmx:100814332 391.349