Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g0771 ATGGACGCAGCAGCAGTAGCTAGGGTTTCCAATGGCGGTGGCGGCGTAGTTCGCTTCCCGTTATCTGCATCGAGCGCTTTGGTAATTCAGAAAGGGGACATCACCAAATGGTCCATCGATGGTTCCACCGACGCAATAGTAAATCCCGCGAACGAGAGAATGCTTGGTGGTGGTGGTGCCGATGGAGCTATACATAGGGCCGCAGGCCCACAACTTGTTGAAGCGTGCCGCACTGTTCCTGAAGTTAGGCCCGGAGTTCGGTGTCCAACAGGGGAAGCAAGGATCACACTTGGTTTTATGCTGCCTGCTTCTCATGTTATTCACACTGTTGGCCCAATCTACAGTAGTGATAGTAATCCGTCTGCCTCTCTGGCGAGTGCTTACAGGAATACTTTGAGGGTTGCAAAAGAAAACAACATTCAGTATATAGCATTCCCAGCCATATCATGTGGTGTCTATGGATACCCGTTTGATGAAGCTGCTACAGTTGCAATTTCTACCATCAAAGAGTTTCCTAATGACTTTAAGGAGGTGCACTTTGTTCTGTTCTCCCCTGATATATATGACATCTGGTTAAATAAGGTAGATGAGTTGTTGAAAGATTAG 606 0.4752 MDAAAVARVSNGGGGVVRFPLSASSALVIQKGDITKWSIDGSTDAIVNPANERMLGGGGADGAIHRAAGPQLVEACRTVPEVRPGVRCPTGEARITLGFMLPASHVIHTVGPIYSSDSNPSASLASAYRNTLRVAKENNIQYIAFPAISCGVYGYPFDEAATVAISTIKEFPNDFKEVHFVLFSPDIYDIWLNKVDELLKD* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g0771 201 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 13 200 - -
Pvu1g0771 201 SMART YBR022w_8 26 164 IPR002589 -
Pvu1g0771 201 CDD Macro_OAADPr_deacetylase 27 194 - -
Pvu1g0771 201 SUPERFAMILY Macro domain-like 26 197 IPR043472 -
Pvu1g0771 201 Pfam Macro domain 47 164 IPR002589 -
Pvu1g0771 201 ProSiteProfiles Macro domain profile. 14 199 IPR002589 -
Pvu1g0771 201 PANTHER MACRO DOMAIN-CONTAINING PROTEIN VPA0103-LIKE ISOFORM X1 13 200 - -
Pvu1g0771 201 Gene3D Leucine Aminopeptidase, subunit E, domain 1 17 201 IPR043472 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g0771 32 112 C2H2 Transcription Factor Family AT5G01310 37.778 7.37e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g0771 K23518 - gmx:100811169 372.474